Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN07625

FASTA Sequence
Unigene ID: UN07625Length: 1180 SSR 
GGACAAATCCCAGAAGAGAAAAAAGAAGTCAATAAGATCGAACTCTTAAAAAATAAAATAAAAATAAGATCGAACTCTTACTACAA
ATCTCTCAACGCTCTTTCTAAGCTTACATCAAGAATTAAGATCCAAGAAGATTCATCGTACACATCCATGGACCAGTACCCATCGT
CTTTGGTCGATACTTCTTTAGATCTCACTATAAGTGTTACTCGTATGCGAGTTGAAGAAGAATCCACGACAACTGCTCTGGTGGAT
GAATTAAACCGAATGAATGCTGAGAACAAGAAGCTCTCAGAAATGCTAACTTTAATGTGTGACAAGTACAACGTCTTGAGAAAACA
GCTTATGGAATATGTTAACAAGACCGAGAGAGACCAAGTCAGTCCTCCCAAGAAACGCAAATCTCCAACGAGAGATGACACAAATA
GTTCGGCTGTGGTCGGTGGAGTGTCCGAGAGTAGCTCTACGGATCAAGATGATCAGTATCTGTGTAAGAAGCAAAGAGAAGAGACA
GTTGCTAAGGATAAAGTCTCAAGGGTTTATTACAAGACCGAAGCTTCAGACACTACCCTTGTTGTGAAAGATGGGTTTCAATGGAG
GAAATATGGACAGAAGGTGACTAGAGACAATCCTTCTCCAAGAGCTTACTTCAAATGTGCTTGTGCTCCAAGCTGTACTGTCAAAA
AGAAGGTTCAAAGAAGTGTGGAGGATCAGTCCGTGTTAGTTGCAACTTATGAGGGGGAACATAACCATCCAATGCCGTCGCATATC
GATTCAAACAGTGGCCTAAACCGTTCTCTTGGTGGTCCAGCTGCTGCAGCCAACAGAAGTAGGAGCTTGGCTGAGCCTGTGACTAG
CATCGATTTGACTGAATCCAAGAATGTGACAAGCCCATCAAGAATAGATTTTCCAGAAGTTCAGAAACTTCTGGTGGAGCAAATGG
CCTCTTCCTTGACAAAAGATCCTAACTTCACAGCAGCATTAGCAGCAGCTGTTACCGGTAGATTGCACCAACAGAATCAGACTGAT
AAATAATTTAGTTTCAAATTCTGTTAGTGTCTTTTTAGATTGAACTTGGCATATGAGAGAGAGAGAGAGTAGATCATATGATCACT
TCCGATACTAAAAATGTAACATTGTAATCATTTTTCATGCAATCTCCAATACCTAGTTTGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACQ76806 WRKY transcription factor 40 [Brassica napus]13392e-145
ACI14400 WRKY40-1 transcription factor [Brassica napus]12763e-138
ABA71354 transcription factor wrky [Brassica napus]12584e-136
XP_002889272 WRKY DNA-binding protein 40 [Arabidopsis lyrata subsp. lyrata]12423e-134
NP_178199 putative WRKY transcription factor 40 [Arabidopsis thaliana]12414e-134

Swiss-Prot top hits (Blast detail)Scoree value
Q9SAH7 Probable WRKY transcription factor 4012412e-135
Q9C5T4 WRKY transcription factor 183541e-032
Q9SK33 Probable WRKY transcription factor 603235e-029
Q9ZSI7 Probable WRKY transcription factor 472572e-021
Q8VWV6 Probable WRKY transcription factor 612528e-021

TrEMBL top hits (Blast detail)Scoree value
C5H9Z4 WRKY transcription factor 4013391e-145
C4N0X1 WRKY40-1 transcription factor12762e-138
Q3HM23 Transcription factor wrky (Fragment)12583e-136
C0SV39 Putative uncharacterized protein At1g80840 (Fragment)12413e-134
B9DGG9 AT1G80840 protein12361e-133

Arabidopsis top hits (Blast detail)Scoree value
AT1G80840.1 WRKY40; transcription factor12421e-136
AT4G31800.1 WRKY18; transcription factor3541e-033
AT4G31800.2 WRKY18; transcription factor3541e-033
AT2G25000.1 WRKY60; transcription factor3234e-030
AT4G01720.1 WRKY47; transcription factor2572e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  100%

Unigene MembersMember information