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Information for unigene UN07660
| FASTA Sequence |
| Unigene ID: UN07660 | Length: 1950 |
SSR | | AGTCATCAAATCTTTTAATCAAACACAGGCAGGCTAGTAGTTCCCAACTTCCCATAGATTTAGTCCTAAAAACAATCTGAAAAAAA
CATATCCAACAGGAGAGAAACCAATGAGGATACATTTCCTAGATCAGAGAAATAGATAAGGCTTTGATGGGATAGAAGCAGGAAGA
ATCCATCACAGCTTGCGTCTTATGCCGTTGAAGAGAAGGCTTAAAAGAACACTATACCCTTTTTCACGTTTTTATCATCAACCAAA
TGAACCACGGCAATACTCTGTTCCGCAGAAGCACCTCTTTTTACCATATATAGGATTGCCATTTTGAGCTCCGCTTGGTCGTGAAA
CACCATAGTCATAAGTTAACTCAGTCATGGGAGGGATGTGTGAGATTGCAAAGAAGGAGACATGCAAGAAGAGCTGACCGTTGTTC
TCATAACTAACCGGCTGCCAGAAAACATTAGGGGAGCAACTATGGTTCATGAACCGAGCAACATTCCCAATATTCTTAGCACTGAT
TATAAGAGGCAGTGGGAGTTCAGGTTCTTCACTCATCTCCTCAGAAGCACCTTCGTCTGCTAAGCCAGGCTCATAGTTCCATTTGA
AAGGGGTATAGACACGGGTTGTATCAAAAGTATAATCATCATTACCCATCGTCTGCTGCACCTTCGACTTGTCTCTGGCCTCACCT
GCATACACACATATAAACGCACCAGCACGAATAGGATCCCACGAGCGCAAGCCCCATCCTCTGTTCACCGTCTTGAAAACTTCCAG
CCTCACTTTCACTCCCATTTGAGTCACCTTGCTTTTGCAGGTCAAGCACGGACAAGACGGGCTGCACTCATACACCATAGGCTTGC
GTCTAACTAGAATATCATTCCCTGTGTAAGGGAAATCACCTCCGTTTCTCCTTATGCAGTGACACTCCAAGTTCCCCGGTTTGCAT
TTGTTGCCACAAGCGCATCCACTAGAAGACTGCCCCGTCGTCGTCAGCTGAAAAGACATGGAGTATTTCACCGTTGTGGAGTAGGT
GAAATAAGGAGGACCATTCTCGTTATCAACCTCGTTCACAAGCGAAACAGCTATGCCTTCAACACCGGAAGTGAGATCAGGGAGGA
TGAGTCCTTTCCTCGAAGACTTACCCGTCTTCCACTTTTGGATCTCAGTCCATGTAGCAAAGGCAGGAGGCTGACCAGGAGCTCTC
ACTAGTTTATACTTGAAGGTGTCGTGTCCCGACTTCCCTTTCTCTATCCACGCCTCTTTGATCTCATAGACCCCATCGTAAACATA
GATCTTAACCCTATGAGTAGACTCTTTCAATCCCCTTATCACCCTAACCGCACCGTTCCTATGCAAGCTCTTCTCCAACGCGAGGT
TACCCCTTTCAAGCTTTTGGTCAGATGCTTCCTTGTCTTTATCAGCATGACCACCCTGACCGGTATATATCAGAACATCCGGATTA
ACATCACTATATCCCGAAGAGACAATGCTGGTGGCGATAGGCTCCTCTTCGTTATCTCCCTTGACAACCAGATAGTCAATGCCAGC
CATTGACGGAGAATGTAACCCGACCAAACACATCTCAAACCTGAAGAAGAATATCAAATGGTGAACCTTTCTACTTCTTCTCTGTT
TCTTCACAGATTAACCTAACTACGAAACAGCTTCTACTATCAAAGATCGGAGATTTTCAACACATGCAATGTATAGAGAGCCCATC
ATTGCAGATTCGGAGAAGAAGAGAAAAAAAACACTCTTTGTTCAGTCTCTAGTTTTCTCCGTTTACAGATTCAAACAGAGAGAGAG
AGAGAGAAAGCCAAAAAGGTTAAAACTTTACATAGAAACCTGGAAGGTTTCGCAACCCTTTGATCTCTGATTAGGGTTTCGAAGAT
TGTCGCCGTCTCCGTTTGAGTTCGTCATGTGAAGAAGTTTAGTTGCATTTGCCACTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196113 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Arabidopsis thaliana] | 2082 | 2e-231 |
| XP_002873176 hypothetical protein ARALYDRAFT_487281 [Arabidopsis lyrata subsp. lyrata] | 2073 | 3e-230 |
| XP_002525581 histone-lysine n-methyltransferase, suvh, putative [Ricinus communis] | 1578 | 6e-173 |
| XP_002303967 SET domain protein [Populus trichocarpa] | 1548 | 2e-169 |
| XP_002336307 SET domain protein [Populus trichocarpa] | 1539 | 2e-168 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FF80 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 | 2082 | 1e-232 |
| Q9C5P4 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 | 1500 | 3e-165 |
| Q9C5P1 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 | 1024 | 5e-110 |
| Q93YF5 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 | 964 | 4e-103 |
| Q8VZ17 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 | 783 | 4e-082 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0SVN4 Putative uncharacterized protein At5g04940 (Fragment) | 2082 | 2e-231 |
| B9SHW2 Histone-lysine n-methyltransferase, suvh, putative | 1584 | 9e-174 |
| B9GXL1 SET domain protein | 1548 | 1e-169 |
| B9GLS5 SET domain protein | 1539 | 1e-168 |
| B9P5N0 SET domain protein | 1539 | 1e-168 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G04940.1 SUVH1 (SU(VAR)3-9 HOMOLOG 1); histone methyltransferase | 2083 | 6e-234 |
| AT5G04940.2 SUVH1 (SU(VAR)3-9 HOMOLOG 1); histone methyltransferase | 2083 | 6e-234 |
| AT1G73100.1 SUVH3 (SU(VAR)3-9 HOMOLOG 3); histone methyltransferase | 1501 | 2e-166 |
| AT1G17770.1 SUVH7 (SU(VAR)3-9 HOMOLOG 7); DNA binding / histone-lysine N-methyltransferase/ zinc ion binding | 1024 | 4e-111 |
| AT2G22740.2 SUVH6; methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / methyltransferase | 783 | 4e-083 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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