Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN07677

FASTA Sequence
Unigene ID: UN07677Length: 1798 SSR 
GAACGCTGCATATCCTTCTTTTCTGAAACCATCTGCTGGTTTTAGTTTTGAGTCATTGGACAAGGGAGTTAAGATAGACGGTCCTT
CCTCAAAGGTTCGTTTGTTCTGGAAGAAGTTTTCGAAAAAGTGCTCAACCAAAGTGAACTCAACACGTCCTCCTTACCAAGACTCA
CAGTCCAACGGTGGCTCCTCGGGAAGGAGCAATCCAGGAAGGAAGATTCGTGACAACATCATCCCTGAGGAAACCGATGTGGGAGC
TTTCTCGCGTTCTTGGAGCCGAGGCTGCCATGCTTCGGATGTTGACTCGGAAGACAAGTTTTTCGCTGATGAAGGAACTTTGGCGT
GGAACTTGCTCATCTCTCGCCTCTTCTTTGATCTCAAACAGAACACAGGGCTAAAGAATGTTGTGCACGAACGAATACAGCGGGTG
TTGTCTAACATGAGACGTCCCAGCTACGTAGGCGATTTAATCTGCTGTGATGTAAAGATTGGGAGTCTCCCGCCTTATATACATGG
TACAAGGATTCTTCCAATGGAGATGAATGGCGTGTGGGCGTTCGAGCTAGATGTTGAATACACCGGTGGTGCGGGACTTATAGTTG
AGACTCGGGTTGATGCTCGAGAGGAAGATCTGCAGAAAGGCATAGCTGAAGGAAAACTGCAGCCAAATGCTTCAGGGGATGTTCCA
CCACATCTCCTTGAAGGTCTTGCAGATTTTGAGAAGCAGTTAAGTGTCCCTGGAGGAACCGTTGATGCACAAGATGTCAAATCTGG
AGGAAGCGATAAAGCTGATGAACCAAAGGGATCAAAAGGTACAAAGGCAGCTCCAAACAATGGATCTAAGTGGAAGTCTATTCTGA
AGAACATCGCTGAGCAAGTCTCTCAGGTTCCAATTACTTTGTCAATAGGAGTCTCTTCACTTCGAGGGACACTGCGTGTACACATG
AAGCCACCTCCATCTGATCAACTATGGTTTGGATTCACAAGCATGCCCGAGATTGAGTTTAACCTTGTCTCATCTGTTGGTGAACA
CAAAATCACAAACAGCCACGTTGCTATGTTCTTGATCAACCGGTTTAAGACCGGGATACGAGAGGTCATGGTGCTCCCTAACTGCG
AAAGCGTAACCATTCCGTGGATGATAGCTGAAAAGGATGATTGGGTCCAACGCAGTGTCGCGCCGTTCATGTGGCTGATCAAGACT
CAACTAGTGATCACGACAGCAGCTTCGAAGCTGCAGAAGGGAAAGCTAAAGCTGAACAAACGAAGAAAACTACCAACGGTCCACAG
AAACCAAGAGTTGAGGAAGAACCTGTGGCTGCACAACCACCAGCTAGCTCAGCAGCTCTTACAGTAGAAAGTGACAAATCCTTGGA
AGAACTCAAAACTCCGCTTTTGGAAAGCAGCGACAAGCAGGAAATAGTAGCAGGAGGAGGAGGAGGAGGCAACGACGGGGAGATTG
TTCCGGTTAGTGTCCAGCCACAGTCGAGGTTTATTGCGGCAACAAATGAAGAGGTTGATACGAGCTTCAAGGGAAAGAAAATGGGA
ACAAGGGAGAGGATGTTTGATTTTAGGAAGAAAGTTGGGGAGAAGTTTGAAGAGAAGAAGCGTCATATGGAGGAAAGAAGTAGACA
GATTGTTGAAAAGATGAGAGGCCCTTGAAGAAGAAGAAGCTTTTTTTTCAGGTTTCAGACAAAAAGAACAAGAAAGTCAATATAGA
GATTAGATTAGGACATTGTTGTTACTTGTATCCGTATATGTTTGGTGGAAAATATCGAAAAGAACTCATTGCGGTATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888912 hypothetical protein ARALYDRAFT_895179 [Arabidopsis lyrata subsp. lyrata]16871e-185
NP_177463 putative integral membrane protein [Arabidopsis thaliana]16852e-185
XP_002892968 hypothetical protein ARALYDRAFT_889192 [Arabidopsis lyrata subsp. lyrata]13913e-151
NP_173224 Putative integral membrane protein conserved region (DUF2404) [Arabidopsis thaliana]13431e-145
AAF97262 Strong similarity to a hypothetical protein T18K17.13 gi|6598861 from Arabidopsis thaliana BAC T18K17 gb|AC010556 and contains a PH PF|00169 domain13384e-145

Swiss-Prot top hits (Blast detail)Scoree value
Q6ZPJ0 Testis-expressed sequence 2 protein1921e-013
Q8IWB9 Testis-expressed sequence 2 protein1822e-012
O94464 Uncharacterized protein C23G7.06c1293e-006

TrEMBL top hits (Blast detail)Scoree value
Q9CAT4 Putative uncharacterized protein T18K17.1317236e-190
Q8L7M7 At1g1782013437e-146
Q9LMU6 F2H15.5 protein13383e-145
Q56XZ9 Putative uncharacterized protein At1g73200 (Fragment)11214e-120
Q56WK3 Putative uncharacterized protein At1g1782010122e-107

Arabidopsis top hits (Blast detail)Scoree value
AT1G73200.1 phosphoinositide binding17233e-192
AT1G17820.1 phosphoinositide binding13434e-148

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  33%
 
104  67%

Unigene MembersMember information