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Information for unigene UN07723
FASTA Sequence |
Unigene ID: UN07723 | Length: 1777 |
SSR | | CTTCTCCTCTTCGTATTTTCTAAAGCTGAAACATCTTGTTACTCTCTCTCTATAAGTCCACCTCTCCTTCAAGCAAAGCATCTTCC
TCTAAGATTGTCTGGTCTTAAATTCAACCAGGCCCATCTAAGGGATCTGGAACAATCTTTGTCTCTGGTACTTGTCTGATCAACAG
AGCAATAACAAAAAAAAATGGATTCCTCTGTCTCCAGATCCACCTCTGTAGTCTCGAATTTGAGTTTCTTGGCTGTGTTGATCGTC
TTCTTGATTTCTTCCTCTTCTCTTACTTCAACAGAAGCATATGATGCGCTTGATCCAGAAGGTAACATTACAATGAAATGGGATGT
CATGAGCTGGACTCCTGATGGCTATGTTGCCGTGGTTACCATGTTCAACTTCCAGAAATACAGACACATTCCATCTCCTGGATGGA
CATTAGGTTGGAAATGGGCAAAGAAAGAAGTCATATGGAGTATGGTCGGTGCGCAAACAACCGAACAAGGTGATTGTTCAAAGTAC
AAAGGAAACATACCACATTGTTGCAAAAAAGATCCAACGGTTGTGGATTTGCTCCCCGGGACGCCTTACAACCAGCAGATTGCTAA
TTGCTGCAAAGGCGGTGTACTGAACTCATGGGTTCAAGACCCTGGCAATGCTGCTAGCTCCTTCCAGATCAGTGTTGGTGCTGCTG
GAACCACAAACAAAACGGTCCGCGTGCCGAGAAACTTCACTCTCATGGGCCCTGGTCCTGGCTACACTTGTGGTCCAGCTAAGGTC
GTTAGACCAACCAAGTTTGTCACCACTGACTCTCGCAGAACCACTCAGGCTATGATGACATGGAACATTACATGCACATACTCACA
GTTCCTTGCTCAAAGAACACCAACTTGCTGCGTTTCTTTGTCTTCTTTCTACAACGAAACCATTGTTGGATGTCCAACTTGCGCTT
GCGGATGCCAAAACAACAGAACAGAGTCTGGTGCCTGTCTCGACCCTGATACACCGCACTTGGCTTCTGTTGTCTCACCACCGACC
AAGAAAAGGAACCATCTTGCCTCCACTGGTGCAATGCACAAGACACTTGTGTCCCATCAGAGTGCATTGGCACGTGAAGCAGAACT
ACAAAGAGTATTGGCGAGTGAAGATCACGATCACAAACTTCAACTACCGTTTAAACTACTCGCAGTGGAACATGGTGGCACAACAT
CCGAATTTCGACAACATCACTCAGATCTTTAGTTTCAACTACAAATCTCTCACTCCTTATGCAGGACTAAATGATACGGCGATGTT
GTGGGGAGTGAAGTTCTATAATGACTTCTTATCAGAAGCAGGGCCTCTTGGGAATGTGCAGTCAGAGATTCTGTTCCGTAAGGATC
AAGCAACCTTCTCGTTTGAGAAAGGATGGGCTTTTCCTCGTAGGATCTACTTTAATGGAGACAACTGTGTCATGCCGCCTCCTGAC
ACTTACCCTTTTCTCCCCAGCGGTGGTTTCCGACCAGAAGTCTCTGTCTTCGCCTCCGTGCTCCTCCCTGTTCTTCTTGTCTTCTT
CTTCTTCTTCTCCGCGTTAGTTTCATATTGACGGTTTTGCCACTGACGAACGATTCTGGGTCCGGTTCGGTTAGGGTTAGGCCGTG
GCTGGGTCTGTTTAAACGGTGGAGTGGTGTACACGCTATTTATGATTCTTTTGTTTCCTAAAAATGGTAATCTTTTCATAATTTTT
GTATGTAATATAGCTTTCAGCTTACTTGTTTTCCTTTATTTTGTTATTAGTTTCTCT
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GenBank top hits (Blast detail) | Score | e value |
NP_568930 protein COBRA [Arabidopsis thaliana] | 1483 | 6e-162 |
AAM62930 phytochelatin synthetase-like protein [Arabidopsis thaliana] | 1479 | 2e-161 |
XP_002866404 hypothetical protein ARALYDRAFT_496244 [Arabidopsis lyrata subsp. lyrata] | 1471 | 1e-160 |
XP_002330139 predicted protein [Populus trichocarpa] | 1280 | 2e-138 |
XP_002514629 Protein COBRA precursor, putative [Ricinus communis] | 1263 | 2e-136 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q94KT8 Protein COBRA | 1483 | 2e-163 |
Q60E70 COBRA-like protein 3 | 1143 | 7e-124 |
Q9SRT7 COBRA-like protein 1 | 1126 | 6e-122 |
Q6Z4G8 COBRA-like protein 1 | 1121 | 2e-121 |
Q8L8Q7 COBRA-like protein 2 | 1087 | 2e-117 |
TrEMBL top hits (Blast detail) | Score | e value |
A9P983 Predicted protein | 1280 | 1e-138 |
B9RLL0 Protein COBRA, putative | 1263 | 1e-136 |
A5BRW4 Putative uncharacterized protein | 1233 | 4e-133 |
B9SYD1 Protein COBRA, putative | 1231 | 7e-133 |
C6THH0 Putative uncharacterized protein | 1196 | 8e-129 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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