 |
Information for unigene UN07723
| FASTA Sequence |
| Unigene ID: UN07723 | Length: 1777 |
SSR | | CTTCTCCTCTTCGTATTTTCTAAAGCTGAAACATCTTGTTACTCTCTCTCTATAAGTCCACCTCTCCTTCAAGCAAAGCATCTTCC
TCTAAGATTGTCTGGTCTTAAATTCAACCAGGCCCATCTAAGGGATCTGGAACAATCTTTGTCTCTGGTACTTGTCTGATCAACAG
AGCAATAACAAAAAAAAATGGATTCCTCTGTCTCCAGATCCACCTCTGTAGTCTCGAATTTGAGTTTCTTGGCTGTGTTGATCGTC
TTCTTGATTTCTTCCTCTTCTCTTACTTCAACAGAAGCATATGATGCGCTTGATCCAGAAGGTAACATTACAATGAAATGGGATGT
CATGAGCTGGACTCCTGATGGCTATGTTGCCGTGGTTACCATGTTCAACTTCCAGAAATACAGACACATTCCATCTCCTGGATGGA
CATTAGGTTGGAAATGGGCAAAGAAAGAAGTCATATGGAGTATGGTCGGTGCGCAAACAACCGAACAAGGTGATTGTTCAAAGTAC
AAAGGAAACATACCACATTGTTGCAAAAAAGATCCAACGGTTGTGGATTTGCTCCCCGGGACGCCTTACAACCAGCAGATTGCTAA
TTGCTGCAAAGGCGGTGTACTGAACTCATGGGTTCAAGACCCTGGCAATGCTGCTAGCTCCTTCCAGATCAGTGTTGGTGCTGCTG
GAACCACAAACAAAACGGTCCGCGTGCCGAGAAACTTCACTCTCATGGGCCCTGGTCCTGGCTACACTTGTGGTCCAGCTAAGGTC
GTTAGACCAACCAAGTTTGTCACCACTGACTCTCGCAGAACCACTCAGGCTATGATGACATGGAACATTACATGCACATACTCACA
GTTCCTTGCTCAAAGAACACCAACTTGCTGCGTTTCTTTGTCTTCTTTCTACAACGAAACCATTGTTGGATGTCCAACTTGCGCTT
GCGGATGCCAAAACAACAGAACAGAGTCTGGTGCCTGTCTCGACCCTGATACACCGCACTTGGCTTCTGTTGTCTCACCACCGACC
AAGAAAAGGAACCATCTTGCCTCCACTGGTGCAATGCACAAGACACTTGTGTCCCATCAGAGTGCATTGGCACGTGAAGCAGAACT
ACAAAGAGTATTGGCGAGTGAAGATCACGATCACAAACTTCAACTACCGTTTAAACTACTCGCAGTGGAACATGGTGGCACAACAT
CCGAATTTCGACAACATCACTCAGATCTTTAGTTTCAACTACAAATCTCTCACTCCTTATGCAGGACTAAATGATACGGCGATGTT
GTGGGGAGTGAAGTTCTATAATGACTTCTTATCAGAAGCAGGGCCTCTTGGGAATGTGCAGTCAGAGATTCTGTTCCGTAAGGATC
AAGCAACCTTCTCGTTTGAGAAAGGATGGGCTTTTCCTCGTAGGATCTACTTTAATGGAGACAACTGTGTCATGCCGCCTCCTGAC
ACTTACCCTTTTCTCCCCAGCGGTGGTTTCCGACCAGAAGTCTCTGTCTTCGCCTCCGTGCTCCTCCCTGTTCTTCTTGTCTTCTT
CTTCTTCTTCTCCGCGTTAGTTTCATATTGACGGTTTTGCCACTGACGAACGATTCTGGGTCCGGTTCGGTTAGGGTTAGGCCGTG
GCTGGGTCTGTTTAAACGGTGGAGTGGTGTACACGCTATTTATGATTCTTTTGTTTCCTAAAAATGGTAATCTTTTCATAATTTTT
GTATGTAATATAGCTTTCAGCTTACTTGTTTTCCTTTATTTTGTTATTAGTTTCTCT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568930 protein COBRA [Arabidopsis thaliana] | 1483 | 6e-162 |
| AAM62930 phytochelatin synthetase-like protein [Arabidopsis thaliana] | 1479 | 2e-161 |
| XP_002866404 hypothetical protein ARALYDRAFT_496244 [Arabidopsis lyrata subsp. lyrata] | 1471 | 1e-160 |
| XP_002330139 predicted protein [Populus trichocarpa] | 1280 | 2e-138 |
| XP_002514629 Protein COBRA precursor, putative [Ricinus communis] | 1263 | 2e-136 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94KT8 Protein COBRA | 1483 | 2e-163 |
| Q60E70 COBRA-like protein 3 | 1143 | 7e-124 |
| Q9SRT7 COBRA-like protein 1 | 1126 | 6e-122 |
| Q6Z4G8 COBRA-like protein 1 | 1121 | 2e-121 |
| Q8L8Q7 COBRA-like protein 2 | 1087 | 2e-117 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9P983 Predicted protein | 1280 | 1e-138 |
| B9RLL0 Protein COBRA, putative | 1263 | 1e-136 |
| A5BRW4 Putative uncharacterized protein | 1233 | 4e-133 |
| B9SYD1 Protein COBRA, putative | 1231 | 7e-133 |
| C6THH0 Putative uncharacterized protein | 1196 | 8e-129 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
