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Information for unigene UN07732
| FASTA Sequence |
| Unigene ID: UN07732 | Length: 830 |
SSR | | GAGATCCAGTGAAGGGTTATTAATAAACCAACCATAAACTTCGGGGACTAAACACAAACTCATAGATTTTTGTTTACTAAAGGGTA
GAGAGCATTCAACCAAATCTGGGAAGCTTATGTACAGACAACCACAGAAAAAAACACGTTAAGATTTGAACGGTGGTTTCATGACC
ATATCACAAAAGCTTTCGTTGTCTCAGAAACATGTTTCTTTCTTCAGTTTGTATCAGTCGATGGGTTGCTGCTGCCTTGGGACGAC
GAGAACAAGCTGCTAAACAGCCACGGGATTGATAATTCAATCCCATCACCATCATCGCTCTCCTCTTCTTGCTCAGTAGGGTGACT
GTTCTCACTTCCTTGGCTGCTTGTAGAAGAAGAAGACACACTTCCACCATTTGGTTCTTCAGTTCTTGCAGACTCCGTCTTGGTCT
CATCCGAAGGCAACTCATACCTACAAACCGGACACGAACAATGAAGCTCAAGCCACGGGAGCAAACAGTCACCGTGGAACTTGTGC
TTACAAGGCATCTCTTTCGCTTCCATCCCAATCTCAAAATCGTCCAAACAAACCGAACACTGCAGAGTATCCTCCTCTTGGATTTT
GACAATAGACAAAGACTCAACAGCTTCTTTGAGAGCTGGAGGTGTTCCGTATCTGTTGGATCGTTGTCTGCTAAACGCTGAAGAAG
GGCTTCGAATCCAGGACCGATGAAATACTCACTCAGAGAACCACCATCCACCATGATCAAGCGTCCTCTCTCTCTATCACCACCAC
CGCCACCATCTCCGTTGTTGTTGTTGTTGTTGTTGTCATCAGGTTCAAGCGTCGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ADK63410 C3HC4 type zinc finger protein [Brassica rapa] | 554 | 1e-054 |
| XP_002894508 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 507 | 3e-049 |
| NP_564693 RING/U-box domain-containing protein [Arabidopsis thaliana] | 433 | 1e-040 |
| XP_002303979 predicted protein [Populus trichocarpa] | 413 | 2e-038 |
| XP_002285765 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] | 393 | 5e-036 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0II22 RING finger protein 126 | 246 | 2e-020 |
| Q9BV68 RING finger protein 126 | 234 | 6e-019 |
| Q6DIP3 RING finger protein 126 | 230 | 2e-018 |
| Q7T0Q3 RING finger protein 126-A | 228 | 3e-018 |
| Q91YL2 RING finger protein 126 | 228 | 3e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZVU8 At1g55530/T5A14_7 | 433 | 8e-041 |
| B9GXX2 Predicted protein (Fragment) | 413 | 2e-038 |
| B9GLB5 Predicted protein (Fragment) | 393 | 3e-036 |
| Q9FM98 Genomic DNA, chromosome 5, P1 clone: MCD7 | 390 | 7e-036 |
| Q6NMJ8 At3g13430 | 376 | 3e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein | 433 | 5e-043 |
| AT5G56340.1 zinc finger (C3HC4-type RING finger) family protein | 390 | 4e-038 |
| AT3G13430.1 zinc finger (C3HC4-type RING finger) family protein | 376 | 2e-036 |
| AT3G13430.2 zinc finger (C3HC4-type RING finger) family protein | 376 | 2e-036 |
| AT3G19950.1 zinc finger (C3HC4-type RING finger) family protein | 307 | 2e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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