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Information for unigene UN07753

FASTA Sequence
Unigene ID: UN07753Length: 2800 SSR 
GGACGTTGAAATAAGATTTTCTTTTGTAGGCTTAGTTTTTCTAGTTTTCTGTTTTCTCTGGGCGATATGATAATCTCAATTCTCAA
AAGAATCAGATTACTCATTAGGCAGATCAGTCAGTCGGCTGCCTTTGAGACGCCTCGGCAAACGGTTACTAGTGGAGATGAATCTA
GTGGTTGGAAGCAAGTAGACGAAGCTCCAACAAAGCATGTTAAATTTCGTGAGCCTCCCAGCAAGATAGTTATGGACGAAGCAGAA
GGACAGTCAGATACCAAAAATCCACCATATGTCCCTGCGTTTGATGATCCTAGCACCTCAAATTCTCCTATTTTACCCCCCGTCCG
TGAAGAACCATCGTCATCTTCGGAGAGTGAAGATGATGATGATGACCCGTTACCAGGTATAGAGGATCTTCAAATATCAGGAGAAC
CTTATCCTGGACATGAGCTTCAGGCTTGTGGTTACTCCGTTAATGGAACGACAAGTTGTAACTTTGAGTGGGTGTGTCATCTTGAA
GATGGATCTGTGAATTACATTGAAGGAGCAAAGCAGCCAAATTATCTTGTCACTGCTGATGATGTTGATTTATATCTTGCTATTGA
AGTTCAGCCTTTGGATGACAGGAACCGCAAGGGGGAGCTTGTCAAGGTTTTGCCAATGAAAATCGGAAGATAACTTGCCATCCAGA
GATGCAGAGACATATAGAGAAGAATCTTCATAGTGGTCATGCTTCATACAAAGTTTCTGTTTCGACTGGTTTCCTAGATATATGGG
AAGACACTACGCTGTCTATAAAGAGAGAAGGTTACACTATCAAGTGTAATAACGATATCATAGTTGCTGAGAAGTTCTCATCTTCT
TCTACTGCTGTAACAATTCCGTTTGGGCAGCCTGAAGAATTTGTTATAGTTGCTTCTGATGGTACTAGTGAATGTTCCTTGCGAGC
AGATAACGGATCAGCAGACCTTAGCTGCTCAAGAGATACAATAGTACTCACCCTGAGATTATTTAGCATGAGGGCTCTACAGAGAA
AGAAGGGAAAGAGGAGAGGATTTTTATTTAACAAATGAGATTTTTTTGTATATAATTATTATTTTGAGCTCTGTCTTCTAACAGCT
TTATATATATTGAGCAAAAAGATTGCACCCCTTTGTTTTGTAGCCTTGTCAATCAATTTGTTCATGAGATAAAACAATATTTGTCC
CTTGTTTATATAATGAAAATCCAACTAATATTACATTTGATCACCTCCAAATATCACTGCTCTGCAGGCACATTACATTCTATTTT
GTCCACCTGTTTGATCACACTAAACAATTAGCCACAGCGGCTTTGTTACGAAGATGAATAGTAAAGTTTTAAGGTGATATGATACA
ACAACAATGAAGTTACATATAAGTAAACATATATTCAGCTGTGTCTGAATTTAGGCCGCACAGTGATAACACCTGGTCTTGTCTCA
TCAAACCTGTACCTGTTATCTTCAAAGAAAGTCTTCACAGCTAGAGGAAGTGAAGCATGTCCGCGACTGTGTTTACCAATACCTGT
TACAACCTGCAATGAGTTCCTTAGCTCTCTAGAAGAAGCTCTTTGACGGTCCAGGCCTTCCACATCTAATCTACCACAAGGCTCTT
GTGACGGAGATCGCAGAGCTGCGTTCTTTGACCTACCTCTATTTGGTGATACCGAACGGTTCACTGTGAACTGACGTTCGATCCTT
TGCAAACGTTCTTGTAACACTAGAACAGCTTCTGCTGCGTGGAGACCATGCAGGTCCAACTTCCATATGTCGTTATTCCTGTTTGT
TATGCCTAAGATCTTATTGGCTGCCTCAGCATTCAGTTTCTCAGCTGTTGACCAATCCTCTCTTGCTTTCTCTGAATGCTGCTTCG
CAGAAACATGGTCATTTCTCATAAAAGCATTTTGGGCAGCTCTAGAATGGTTTGAGGCGGATCTCATCATTTTTAAAGCATCCTTT
CGATGAGTCAAGTAGAGGTCGTCTTCTTCCCATTCAGGTGCTATAGGAATGGCCTGAAGCCGCTGAATGATACTACCTAAGTCAGA
AACATCATCATCAGGTAGCTTTTCACTCTCATATGCATTCACCAGAAACGAACTTCCACCATTCTCACATGTAGACCTTGCAGCTA
TATTCACCGAACTTGTAACAGTCCTCCCAGATATTCTATGTTCGGATTGTCTATTAGTTGGAACCTCAGCTTCCTCGTAAGCCATT
CCTTGCAAAAAAGCTAAGGCCATCTCAAAATTATCTTCTGTAGATAACAATATATCCCTTATCAAGCTATCATCAGCCCAGCTATT
CATCTCCTTCAGCTTGCTGAAGGCCGACGAATCATGATGACTAGTTGGAGTCAACAAAGGGCTAGGTTTGCTTCTCCAATCCTTAC
TCTCTGTCAGTGCTGGAAACTTCGGAGGAGGTAAGAGGACGGAAGAGAAAGACTTTTCAGAAGATTCGTGGTTTCTCCTGACCAGC
TTTCCTCTTATTACATCTAAGTGTGGTGGATTAACACTAGTTGAAACAGGCGGGAATGGATCATCATCCTTAATCTCGCTTTGGAG
ACCTTGTTGTCTTTGTCTCTGCTTGAGATCAAAGGCAGTCCAACCAGATGATTTGCCTTTCATCCATGACATCTTTTGTATTGTAT
TATTATTATTATTATCTCCCGCAGTAACTGATCAATCTCTCTCCCTTTCCATTACATTGATACTTCAAAGGTCTTTCCCCGAGGTC
AAATAAACTACGGCAAATGAAATCGAGAGCAGTTCGGTTTGAATGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197743 smr (Small MutS Related) domain-containing protein [Arabidopsis thaliana]10142e-107
XP_002874133 hypothetical protein ARALYDRAFT_910364 [Arabidopsis lyrata subsp. lyrata]9963e-105
ABN05922 Smr protein/MutS2 C-terminal [Medicago truncatula]8011e-082
XP_002267329 PREDICTED: hypothetical protein [Vitis vinifera]7123e-072
NP_197740 uncharacterized protein [Arabidopsis thaliana]7052e-071

Swiss-Prot top hits (Blast detail)Scoree value
Q08954 Smr domain-containing protein YPL199C1277e-006

TrEMBL top hits (Blast detail)Scoree value
Q9LT11 Genomic DNA, chromosome 5, P1 clone:MQM110142e-107
A2Q1V5 Smr protein/MutS2 C-terminal8018e-083
B9IP21 Predicted protein6852e-069
Q9LT13 Gb|AAF01580.16314e-063
B9RWA8 ATP binding protein, putative5689e-056

Arabidopsis top hits (Blast detail)Scoree value
AT5G23520.1 LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Region of unknown function DUF1771 (InterPro:IPR013899); Has 91 Blast hits to 91 proteins in 45 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 45; Plants - 27; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).10157e-110
AT5G23490.1 unknown protein7056e-074
AT5G08440.1 unknown protein5561e-056
AT5G23510.1 unknown protein4663e-046
AT5G23510.2 unknown protein4663e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  29%
 
62  29%
 
123  43%

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