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Information for unigene UN07759
| FASTA Sequence |
| Unigene ID: UN07759 | Length: 1109 |
SSR | | GGTCTGTTAATTACTCAGCCATATTGAAATTTATATCAGCTAGTAAAGATCGATTCACTTTGGACACATTGTCAGCTAGTTCACTT
TTTTGTTTGAACATTTAAGGTAACAGTAATAGCAACTAAACGAAAATAGGTGATATTTTGCATTTTGTTTTATGCACTTAAACGAT
ACTAGAGCATCTTGCGAAAGTAATTCGAGAGAGAGAGAGAGTACAAAATGTATTCACAGGTCGGGATACCACTAAAATCCACTTCT
GGTATATATATTTTTTAACTGTCTTCTCGTTCCAAACTAATCATTAACCTGATGAATTCCTTCTCCACCGGTTTATTCTGAAGTAC
TGGCTGACCGGAGTTTCTGGAACCGGTATGCATTTTCCGATCACCGCCAATGGCCAACTGATGGAACCAATCCCAATCGAGATGAG
CCACATCTCCCAGTCAAGCTTCGTCGTTGAGGCAAATGTTCCAAGGAACTCCACGATGACTACCTGGAGCACAATGGTGATACAGA
TGATGCCAACAAAGAGGTGATTACGAAGAACTCCTTGGAAAATGTTGAATTCATCTGGCTTTCGTGCGTTGAACTCGTTGAAGATC
TGGCAGATCACAAATGCATTGAAGATGACTGTATTCTTCACTCTCTCGGCGTTGGGCTTATGATCCAGTTGAAGGATACTTATTCC
ACGGAAATTGAGGACTAACAAGACTGTCACTTGGTATATCGCTTGTACAAACAAGTTTCTCCACATGATATTTGTGATGAGAGGTT
CTCTTCTGCCAACAGGATCTCGATCCATCAAGTGATCGGTTGGGTGGTTCGGTGGCTAAAGCAAGAGCCCCAAGAGTATCCATTAT
AAGATTGACCCAGAGGAGCTGTACTGCAGTTAGAGGAACATCACCCGAGGATATGGCAGCCACGACATTAATGACAAGAGCTGCGA
CATTAACGGTAAGCTGAAACTGAATGAACTTTTGGATATTGGCATAGACAGACCGACCCCAACGGACAACCTTCACAACGGATTCG
AAGTTGTCATCCAAGATAATGATGTCTGACTTTTCCTTTGCAACTTCAGTGCCTTGGATACCCATAGAGAGACCTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002867382 autoinhibited Ca2+-ATPase 10 [Arabidopsis lyrata subsp. lyrata] | 836 | 3e-087 |
| CAB43665 Ca2+-transporting ATPase-like protein [Arabidopsis thaliana] | 833 | 7e-087 |
| NP_194719 Ca2+-transporting ATPase [Arabidopsis thaliana] | 833 | 7e-087 |
| BAF00961 Ca2+-transporting ATPase like protein [Arabidopsis thaliana] | 833 | 7e-087 |
| BAA97361 Ca2+-transporting ATPase-like protein [Arabidopsis thaliana] | 458 | 2e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SZR1 Calcium-transporting ATPase 10, plasma membrane-type | 833 | 3e-088 |
| Q9LF79 Calcium-transporting ATPase 8, plasma membrane-type | 650 | 5e-067 |
| Q9LU41 Calcium-transporting ATPase 9, plasma membrane-type | 602 | 2e-061 |
| Q9LIK7 Putative calcium-transporting ATPase 13, plasma membrane-type | 422 | 1e-040 |
| Q9LY77 Putative calcium-transporting ATPase 12, plasma membrane-type | 417 | 5e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q0WPI8 Ca2+-transporting ATPase like protein | 833 | 5e-087 |
| B9DH83 AT5G57110 protein | 458 | 2e-043 |
| B9HAW9 Autoinhibited calcium ATPase | 458 | 2e-043 |
| B9RKV6 Cation-transporting atpase plant, putative | 458 | 2e-043 |
| Q0WV19 Ca2+-transporting ATPase like protein | 458 | 2e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G29900.1 ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10); calcium-transporting ATPase/ calmodulin binding | 834 | 2e-089 |
| AT5G57110.1 ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calcium-transporting ATPase/ calmodulin binding / protein self-association | 650 | 5e-068 |
| AT5G57110.2 ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calcium-transporting ATPase/ calmodulin binding / protein self-association | 650 | 5e-068 |
| AT3G21180.1 ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9); calcium-transporting ATPase/ calmodulin binding | 602 | 2e-062 |
| AT3G63380.1 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) | 467 | 8e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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