Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN07786

FASTA Sequence
Unigene ID: UN07786Length: 788 SSR 
GGGAGAGAGAGAGAGAGAGACGGCGTCTCTAGTTGTTGTTCGTCGAGAGACTCTCGCCCAGCGCCGCGTTCTCTCTCTTCTCTCCG
GTAAACCTTCGTCGATTTTCACCAATTCCGATCATCCGACTCATTGTTTTACATCCCAAACTCTCGCTGTCCTGGTTCCATGGATA
ATAAAGGCCCAGTGCAGAAGACAGTTGTGCTCGAGCCGTTTATCAAGTTGGTGAGGCTTTTAGCAAGGGCGTTCTATGATGATTAT
ACTACCAAAAGCGATAATCAGCAGAAAACTGCTAGAAGTGACAATAGAGGGATTGCCGTTGTGGTGCTGGATGAGCTTACCAGGAA
GCAATGGGTGAGAGAAGAGGACTTGGCTAAAGAGTTGAAGTTGCACGCTAAGCAACTTAGAAAAATTATACGACACTTTGAAGAAC
AAAACTTGATCATGCGTGACCACAGGAAAGAGACTGCAAAAGGTGCAAAGATGTATAGTGTTGCAGTAGCTGCTACAACTGGTGGT
CGAGCAGAGGACAAGGTTAAGTTCCATACCCACTCGTATTGCTGCCTCAATTATCCACAGATATATGATGTTGTTCGTTATAAACT
GCACCGGATGAAAAAGAAGCTCAAAGATGAACTAGAAGATAAGAATACTGTTCAAGAGTATGGCTGTCCTAACTGCCAGAGGAAAT
ATAATGCACTGGATGCCTTGAGATTAATTTCTATGGAAGACGATGCTTTTCATTGTGAAATTGCAATGGTGAATTGGTTGTGGAAT
GTAACAAGCTACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889449 transcription initiation factor IIE alpha subunit family protein [Arabidopsis lyrata subsp. lyrata]8901e-093
NP_563681 transcription initiation factor TFIIE alpha subunit [Arabidopsis thaliana]8837e-093
XP_002869937 transcription initiation factor [Arabidopsis lyrata subsp. lyrata]7932e-082
CAB52822 putative protein [Arabidopsis thaliana]7895e-082
AAR28008 TFIIE-alpha 2 [Arabidopsis thaliana]7895e-082

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q93ZW3 Putative uncharacterized protein At1g032808835e-093
Q6S7C4 TFIIE-alpha 2 (Fragment)7894e-082
Q9SUP2 Putative uncharacterized protein AT4g203407894e-082
B9N8Y4 Predicted protein7421e-076
B9IDZ5 Predicted protein (Fragment)7251e-074

Arabidopsis top hits (Blast detail)Scoree value
AT1G03280.1 transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein8833e-095
AT4G20340.1 RNA polymerase II transcription factor/ transcription initiation factor7892e-084
AT4G20810.1 transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein2874e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  25%
 
71  25%
 
101  25%
 
211  25%

Unigene MembersMember information