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Information for unigene UN07843
| FASTA Sequence |
| Unigene ID: UN07843 | Length: 1765 |
SSR | | GGGAGGAAGAAAGAACAAATCGATTCTCTGCGAATCCCTAAGAACGAACCCTAAATTTCCCAATTCGATCGAACGATGGGCAAGAA
CGATTTCCTCACCCCGAAGGCGATCGCGAATCGCATGAAAGCGAAAGGGCTCCAGAAGCTCCGGTGGTACTGCCAGATGTGCCAGA
AACAGTGCCGCGACGAGAACGGGTTCAAGTGCCACTGCATGAGCGAGTCTCACCAGCGTCAGATGCAGGTCTTCGGCCACAACCCC
AACCGCGTCCTCCAGGGCTACTCCGAGGAGTTCGAGAAGACGTTCCTCGATCTCATGCGTCGGAGCCACCGTTTCTCCCGCATCGC
CGCCACCGTGGTCTACAACGAGTACATCAACGACAGGCACCACGTGCATATGAACTCGACTCAGTGGGCCACGTTGACGGAGTTTA
TCAAGTATTTGGGGAAGACTGGCAAGTGTAAGGTGGATGAAACGCCTAAAGGTTGGTTTATTACTTATATCGATAGAGATTCGGAG
ACGATTTTTAAAGAGAGGTTGAAGAATAAGAGGGTGAAGAGTGATTTGGCTGAGGAGGAGAAGAAGGAGAGGGAGATTCTGAAACA
GATTGAGAGAGCTAAGGAAGGTGGTGAAGGTAGTGGTAAAGATGATGGTGAGGAGGAGGAGAAGAAGAAAGGTGAAGACTTGGGGT
TGAAGAGTGGTGTTAAGGTTGGGTTTTCACTTGGTGTTAAGCAGGTTGTTGAGAGCTCCAGCTCGAGCTCGAAACGTGTGTTTGAG
GAGGAAGAGAATGAGAGAGAGGAGGAGGAGGAGGAGAAGAAGAGGAGAAAAGGTGGAGACTTGGAGAAGGAGAGGAGGTCTGCTTT
GGATGAGTTGATGAAGGAGGAAGAGAGGAAGAAGGAGAGGATGAATCGTAAACCTTACTGGCTGTTCCAAGGGATTGTTGTGAAGG
TGATGAGTAAAGCTCTGGCGGATAAAGGGTATTATAAGCAGAAGGGTGTTGTGAGGAAAGTGATTGATGACTATGTGGGGGAGATT
GAGATGATTGATTCCAAGCATGTGCTGCGAGTTGACCAGGAGGAGCTTGAGACGGTGATTCCACAGATTGGAGGGTTGGTGAAGAT
TGTGAATGGGGCGTATCGTGGTTCAAATGCTAGGTTGTTGGGTGTGGATACGGAGAAGTTTTGTGCTAAAGTGCAGATTGAGAAGG
GTGTCTATGAAGGAAGAATCATCAAGTCCATTGAGTATGAAGACATTTGCAAACTGGCGTAGTTGCTATATCTTTAGACCATTATA
TCAGCTTTATGGTACATTGTGTTTCCACTTTGAACCTTTTTTGTGTCTGCAAGCCTTTCTTTGTGTCTGCAAGTGAGTTTCAGACA
ACTCACTGTCAATGATAAAACAGTGTTCAAAAGATTCTGGCTTTTGGTTCCTTTCATTCTCTTTTGTCCAACCAAGCGAACAGGGT
TTGCATCTTAGGTACTGCAGATGGAGATTCTGGCTTTTGGTTGAAGATGATGGGTTTGACTGCATTATGATTCCTGATGGAACGTC
TCATGAGTCACCAAAGGTACCGCAGATGAGATTCTGTTTCATGTCATGTTCTTTACTGTATTGTCTTTGATTTTCATTGGTTTACT
CGATGTTGTTGTACGTGTGACTACTGTAGTATCTTTAAGAAACCATGTGGTGTTTTGATTGTGCTTTCGCAAACAAACTCCCAAGT
TGACTTCTGAGATGAAATGCCATGAAGGGAAAACACATTTAGGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002891832 hypothetical protein ARALYDRAFT_474601 [Arabidopsis lyrata subsp. lyrata] | 1721 | 2e-189 |
| NP_564690 DNA/RNA-binding protein Kin17 conserved region-containing protein [Arabidopsis thaliana] | 1718 | 3e-189 |
| XP_002316291 predicted protein [Populus trichocarpa] | 1607 | 2e-176 |
| XP_002862751 hypothetical protein ARALYDRAFT_497310 [Arabidopsis lyrata subsp. lyrata] | 1568 | 8e-172 |
| XP_002524993 zinc finger protein, putative [Ricinus communis] | 1564 | 2e-171 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O60870 DNA/RNA-binding protein KIN17 | 940 | 2e-100 |
| Q8K339 DNA/RNA-binding protein KIN17 | 940 | 2e-100 |
| Q55D16 KIN17-like protein | 639 | 2e-065 |
| Q9Y7X9 KIN17-like protein | 514 | 6e-051 |
| P40962 Zinc finger protein RTS2 | 304 | 1e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZVU5 Putative uncharacterized protein At1g55460 | 1718 | 2e-189 |
| B9HTJ4 Predicted protein | 1607 | 2e-176 |
| B9SG74 Zinc finger protein, putative | 1564 | 2e-171 |
| B9HMH3 Predicted protein | 1558 | 8e-171 |
| B7FK30 Putative uncharacterized protein | 1519 | 3e-166 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G55460.1 Kin17 DNA-binding protein-related | 1719 | 9e-192 |
| AT5G51795.1 Kin17 DNA-binding protein-related | 510 | 1e-051 |
| AT4G13340.1 leucine-rich repeat family protein / extensin family protein | 161 | 4e-011 |
| AT4G18670.1 protein binding / structural constituent of cell wall | 157 | 1e-010 |
| AT1G62760.1 invertase/pectin methylesterase inhibitor family protein | 142 | 7e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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