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Information for unigene UN07849

FASTA Sequence
Unigene ID: UN07849Length: 1287 SSR 
GGATTATGTGTGAAGTGGTAACATCGCTAAAGAACGATTGCTGTGAGATCCAAGTAAACCGCTTACTGAGATACTGGTTTCTTGAT
CACACCTGGTTTGGTTATAGAATGTCATCAAGTGCCGATTCAGCTCGTGAGCCCTTGTTACCAAAGGATCAGATAGATCCCGTGCT
TCAAGACTTCAACACAAAATCAAGAACCTCTTCAAGCAAAAGAAGACTGCGTCGCTCAAGAAGCGCTCCTCGTGGTGATTGTACCT
ACGACGATAACGATAACGATGTCAAAACCGACGAACCCCCTCTTCATCCAAGTCAACTACTGTTCAGGGATCTAAACCCGAACCTC
AGGCGAGTGATCATGTTCTTGGCTCTATATCTAATCATAGGAACTCTCTGTTTCTACCTCGTCAGAAACCAGATCTCCGGTCACAA
GACCAACGGTGTGTTGGATGCCGTCTACTTCTGCGTTGTAACGATGACAACCGTTGGATACGGTGACCTTGTCCCTAGTAGCTCTG
CATCTAGACTACTCGCTTGTGCCTTTGTCTTCTCCGGAATGGTCCTAGTGGGTCACCTTTTAAGCCGAGCAGCGGATCACCTAGTG
GAGAAGCAAGAGACTTTACTCGTCAGGCTTTCCATCTGCGTCAAAGCTCCGGTCCACTAGACGTTCTCAAGGAGTTGCAACCAACA
AACTGAGATACAAATGCTACGTCACGTTCATTGTCTTTGTAGTCCTCGTCCTTGCTGACAAAAGCTTTAACTCTGGAACCGGACGC
CTTTTCGCTGTGTTTTGGATCTTGACGAGTACTATATGTTTGGCTCAGTTTTTACTCTATGTAGCTGAGTTAAATGCGGAAACTAA
GCAGAGGGAGTTGGTGAAATGGGTTTTGACAAGGAGGATCACAAACAATGATCTTGAAGCTGCTGATCTTGATGAAGATAGAGTTG
TCGAAGCTGCAGAGTTTATTGTATATAAGCTGAAAGAAATGGGGAAGATAGATGAGAAAGATATATCTGGGATCATGGAAGAGTTT
GAGCAACTTGATTATGATGAATCTGGAAACCTGACCAATTCTGACATCGTTCTAGCTCAGATCCAAAGGTAAAGCATTCATTTAAG
TTACTATACCTGCACACAACTATAAGAAGTAAAGAGAGTGAACAGTTCTTTTTTTGGAAATGTTGTTTGTTTCTGTATGTGTGTTT
GTACTGTAATGCCATAGACTCTCTCTCTCTATGAACTGTTTTGTGATGTCTTGAGTGTATAATATACATGGATTTACACGTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864404 outward rectifying potassium channel KCO1 [Arabidopsis lyrata subsp. lyrata]7012e-071
NP_200374 calcium-activated outward-rectifying potassium channel 1 [Arabidopsis thaliana]6941e-070
CAA65988 outward rectifying potassium channel KCO1 [Arabidopsis thaliana]6941e-070
AAM64705 outward rectifying potassium channel KCO [Arabidopsis thaliana]6941e-070
AAF97863 outward-rectifying potassium channel KCO1 [Eucalyptus camaldulensis]4314e-040

Swiss-Prot top hits (Blast detail)Scoree value
Q8LBL1 Calcium-activated outward-rectifying potassium channel 16945e-072
Q9S6Z8 Probable calcium-activated outward-rectifying potassium channel 5, chloroplastic2421e-019
Q9SVV6 Probable calcium-activated outward-rectifying potassium channel 62367e-019
Q9FL25 Probable calcium-activated outward-rectifying potassium channel 22261e-017
Q9XFR0 Probable calcium-activated outward-rectifying potassium channel 32214e-017

TrEMBL top hits (Blast detail)Scoree value
Q0WNY4 Outward rectifying potassium channel KCO6948e-071
Q9LLM5 Outward-rectifying potassium channel KCO14313e-040
Q9ZP53 K+ channel protein4205e-039
Q9AR58 K+ channel protein4188e-039
O82065 Putative outward rectifying potassium channel StKCO1a4152e-038

Arabidopsis top hits (Blast detail)Scoree value
AT5G55630.1 ATKCO1; calcium-activated potassium channel/ ion channel/ outward rectifier potassium channel6944e-073
AT5G55630.2 ATKCO1; calcium-activated potassium channel/ ion channel/ outward rectifier potassium channel6944e-073
AT4G01840.1 KCO5 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 5); outward rectifier potassium channel2421e-020
AT4G18160.1 KCO6; outward rectifier potassium channel2366e-020
AT5G46370.1 KCO2 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 2); calcium ion binding / outward rectifier potassium channel2268e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  100%

Unigene MembersMember information