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Information for unigene UN07855

FASTA Sequence
Unigene ID: UN07855Length: 1945 SSR 
GGACACTGTAGCGAGCGAGCGAAATAGAGATATAGAAAGAGAGAAACAAACTCTTGAGGCGAACGAAACTTTTTACTCAATTCTCA
AGGCGAGAGAGAATCAATCCTCCATTGTATCGATCGATCGATCATGCCTCCCGGTGCGAAGAAGAGAAAGGCGTTGAAGAAGAAGC
AGCAGCAGCAGCAGCAAGAAGCGATTGGAACAAGTACGAACAACAAGAGCTTCAATGGCGATAATCTTCACGGAAATGATGAACAA
GGAAGCCAAGATGATAGGGAAAGTGATAGCACTTTGAGTTCCCCTGTTTCTCATGAGAATCAAGAATTTGGTCTCACAAAAGATTC
ATCATCTTCTTTGGTGCTGAAGGAGAAGGACACTACTGCTAAAGAGATATCAGATGTTACTCATCAGGGACTAGGACCCAAAACTG
GAAATGACGTCGCTGTTGAAAGAGGAACGGGTAACAAGAACAATACTCTGGAGAAATCTCCCATTTCCTCTAATGGCAACTCTACT
CAGGATTCTTCTGGTGATTCAGTTGAGGAAATCGCTCCTGTTGTCGATTCTGTCTCTGAAGTAGTGATTCCTGATAAGAGTGAGCA
TGCTGAGACCTCAACACACTCTAATTTGGTCAAACAGAAGTCTGATGACAAGAAAGAGTATCAATCTCTGGAGAAAGAAAACGGTA
AGGTGGATACTCTTCCAGGGTCTGCTGATGGAACAGGCAGAAAAGCAGAGAGTGTAAGAGAATCTGAAGCTCCAGTATCCTCTGAG
GAAAATCGTCTTTTGTTGCCTGCCCCACCAGCTGTCCGAACTTCATGGTTAAGTTGCTGCGGTTTGTTTGATGCAGTGACAGGGTC
TGACAGATAAACACAGGAGTTGGATAAAGATGGACGCTCATGACATCCAAAGCTCACAGACAACCAAAAAAGCAGAACTTACGGTC
GCTACACTATTTCTTTGTACATCATCTTTGTTAGATAATAATGTGGGCGGCTTTTAGCAACATAAATCTCAATTTACCTTTCATTT
TTGAAATACAGTCTTAATTTGTCCATTAAATGGATTTTTTAGATTCATGAGACTAAATATAGCTCTATTTTTCTTTCAATTACCAC
AACTGTCATTTATATTGTGTAGTTCATTAGATACATGTAGAGGTGTGATCCATCATATCAAGCCTCACAGTTCGAATTTATTCAAT
GAACACAAAGTGATACACACACAAATCAAGATCTGACCCTTTTGTACAGAAAGAATGCATAAATTTAACTGAAGCTTTACTTCAAT
TTCCTATGAAAATATAATCTCTCACACACACGAACACACCCACACGCCGAGCTTCGGGATGGTTGACTTGAAAAGTAGAAAAAAAT
CCGAAAGGCCATAATTTCCTAAGTAGGTTTCTTCACGCCGTGAACAGCAGCGATGTAAAGAAGCTGTGTGACTGAGAGTATGATCA
AGAACGCCTCCATGGTTCTCAGTTTTGCATTTCGCACTTGAAACTCGATTTCTTTCCAGGCGAATCCCATGGCAAGGACTGTGAGG
GTCCATGCAATAGTTGCGGCCATGGCTGCACCCGGTAAGCTTCCCACGGTCCAAGAACGAATGTGGGTAAGGCCAGAGATTGTGGA
AGCTGCACCAACTACTCCCGCAAGCAACGCGAATGTCACAAAGAACCCTGTTGCTGCGTTTCCCATCGGAAAATAAATTGGGGCGA
AATGTGCTGGAAGATTGAAATCAGGTCCGATTTCGAATCCGCGGTCGATGGCTCTGTTCATGGCCCATCCTCCAATCCCTAGAACA
ATCACATACATGCAGAAATTGAGTACCAGAAGTAGAGAGGCAACAGGCTTCATTTGCTCACCCGCCATTTTCCCTTTTGAAAAAAA
AGAATTACAAAAGTGGAAGAGAAGAAAGGAGAACTACAAAATTAGAGTCGTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_174245 AWPM19-like protein [Arabidopsis thaliana]7282e-074
XP_002890814 hypothetical protein ARALYDRAFT_473160 [Arabidopsis lyrata subsp. lyrata]7264e-074
ACU16487 unknown [Glycine max]6361e-063
XP_002519754 conserved hypothetical protein [Ricinus communis]6323e-063
ACU16362 unknown [Glycine max]6323e-063

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C7P9 Plasma membrane associated protein, putative; 66162-669527282e-074
C6T477 Putative uncharacterized protein6367e-064
B9S185 Putative uncharacterized protein6322e-063
C6T3W1 Putative uncharacterized protein6322e-063
B9N9D5 Predicted protein6295e-063

Arabidopsis top hits (Blast detail)Scoree value
AT1G29520.1 AWPM-19-like membrane family protein7288e-077
AT5G46530.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like membrane family protein (TAIR:AT1G29520.1); Has 98 Blast hits to 98 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).6087e-063
AT1G29530.1 unknown protein5146e-052
AT2G34310.1 unknown protein4171e-040
AT2G34310.2 unknown protein4171e-040

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  57%
 
111  14%
 
122  29%

Unigene MembersMember information