RadishBase

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Information for unigene UN07963

FASTA Sequence

Unigene ID:UN07963

Length: 915

AGTTTAATCTAGGTATAATAACCCAAATAAGGAACTAAAGACATCCTTATGGATATATTACAAGAAAAATGTCGTTCAAATTAACA
GATTCTTAGTAATATTTGATGATGAGTTTGTTTAGTTTATCAAAGTGACTCCAATTATTACACGACATATAAGACGACGCAAGACA
AACAAACATCTCAACACCAATCTCTGATCTGGTCCTTGGATTCTCCTTTTGGAAATTTATTACTCTTTTTATTTGCTCAATCTTCT
GCCATGGGGTCATCGTCATCACCGTTCTCGTTGTTGTCATCATCATCATCATCATTGTTTCTACCGTTTGCATTAGCGTTCACAAC
TTGAACCCAAACACTCTGGCTTCTCTCTGCTCCGTTGACCTCTCCCCATGTCTGTTGTTGCCTGTTTGTATCAGCTCCACCGTCTG
AGAATTGCCCCCACACGCTTCTCGTCTTCCCTCCTCCTCCTGCTCCTCCGCTTAGCTCCTCTTCACACCCCGCAACTGTTTTCAGA
AGCTCAGACTGAAGTGATGGGCAGTGTTCCCTCAAATAGTCAAACCCATCTGACCTCATCACAGCGATGAGATTCTCCGCTGCGAA
TTTCAGACAAACGGATTTCAAGGCAGAAGCATTGTAACGGTCAGCAAGAGCTAAGATATTAGCGACGGAGTCTACTGAGATATCCT
TGCAGAGCACAGACTCGCACATTAAGCTCAGTCTAGGCAACTTGTATTTATCAGCGGCTCCTAACAGCTTCGCAGCTAATGTATCT
GACGCTAATGGACCAACAGAAGAACCAGAAGAGGATGCTGACTCCGCATCTTCGATGAGAGCATCCTTGTATATGTAATGAAGCAA
AGCCTTGAAAACCTTAGGCTCCATGTCATTGACTTCGACATCACGCTCCTCCTCC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
XP_002884409 hypothetical protein ARALYDRAFT_896389 [Arabidopsis lyrata subsp. lyrata]	945	6e-100
NP_566212 BTB/POZ and M4 domain-containing protein [Arabidopsis thaliana]	942	1e-099
AAM60841 unknown [Arabidopsis thaliana]	942	1e-099
ABY60311 At3g03740-like protein [Arabidopsis lyrata]	890	1e-093
ABY60297 At3g03740 [Arabidopsis thaliana]	887	3e-093

Swiss-Prot top hits (Blast detail)	Score	E value
P34568 BTB and MATH domain-containing protein 43	163	1e-010
Q7ZX06 Speckle-type POZ protein A	163	1e-010
Q0IHH9 Speckle-type POZ protein B	163	1e-010
Q6P8B3 Speckle-type POZ protein	163	1e-010
Q7T330 Speckle-type POZ protein	162	2e-010

TrEMBL top hits (Blast detail)	Score	E value
Q8LGI9 Putative uncharacterized protein	942	9e-100
Q9SRV1 AT3g03740/F20H23_23	942	9e-100
B0FUP7 At3g03740-like protein (Fragment)	890	9e-094
B0FUN3 At3g03740 (Fragment)	887	2e-093
B0FUP2 At3g03740 (Fragment)	882	8e-093

Arabidopsis top hits (Blast detail)	Score	E value
AT3G03740.1 ATBPM4 (BTB-POZ and MATH domain 4); protein binding	952	3e-103
AT5G21010.1 ATBPM5 (BTB-POZ and MATH domain 5); protein binding	451	4e-045
AT3G43700.1 ATBPM6 (BTB-POZ and MATH domain 6); protein binding	434	4e-043
AT5G19000.1 ATBPM1 (BTB-POZ and MATH domain 1); protein binding	314	3e-029
AT3G06190.1 BPM2 (BTB-POZ AND MATH DOMAIN 2); protein binding	291	2e-026

EST library breakdown for ESTs in the assembly


18	1			17%


21	1			17%


19	1			17%


7	3			50%

Unigene Members