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Information for unigene UN08001

FASTA Sequence
Unigene ID: UN08001Length: 2053 SSR 
ACAATACACATGCTATATCATACAAGAAGAGATAATGCCTGATACACTAAAATACAATACGAGACTGTGTCCTCTACTCGTCTCCA
AAAACAAACCTTATACAAAAAAATATACAACCAGGGGTTATTGTTTTACAAGTTTACAACATCTACAATTCATGAACCTACTCCTT
TGTCCTGAATCCACAAACCAGACCATACGACGACAACTAACAAACAATCAAGTGTCTGTCGTGTCCTTGTTTCGTGGAATAGTTGT
TGTACAAATATATTTTTTTAGGCTCGTAAGTGTTGGTTTCGCAGAGATCTTCCTGTCAGCTATCCTCAGCGTTTTTTATGTCGTTG
TCATTCGTTCCATCGGCTGTTTTACGTACGAATTGGCCACGGACACGAGGGCGTTGTTCTGCTAGTTTTTTCCGGCTTTGGTATCG
TACCTTCTTTCTGAAGCACCTCTCTTTTCTCTTCTGACGGAACTTTGTCAAAGCAGCTTCTCTTTGAGACATCTTATTTTCATCTG
CCACAGTCCCGCTTCCACTGCCGCTTCCACTGCCATCACCACTTCCCCCAGCACCATTACCACTTCCCGTATTCATCCCTCCAGCA
TTAATGCCATTGCTGCTTCCGTATGGATCATTGCTTCCATGACCACTTCCTGATCCACTTCCATTCACACTGTAATTCACTCCGTT
GTTGTTACCTTCAGTCGCCTCATTTGAGGATCCACGTTTTGGCTGTAACTTCCGCTCAGGGATGTGGGCAGGATTATAGGACGAGT
GATGATGATGATGATGATGATGATGATCACAAGGTAGAGGCTGCTTTACCGATGAAGATCCTGCCGAGCTCACTTTTGGAGCTCCA
GGCTTTGTGAAAGCTTTATTCTCAGTCGTGGAACTCATTTCAAAGTTATTGCTCCCGACGCGTGAGCGATGATTATTGGGGAGACT
CTCGGTCATGTTTAGGTGACAATCACATGCCGCTTCAGTTTTTTTCGTAAGATCTTGACAATTATTATCCTGAAGAGAATTGCTTC
CCAAGTTCCCACCAGGAGGCTTATTGTTATTTGCGGCTGGATTATACCTTGAGAAAGCTGAACCCTCTGAACGCCTCAGCACATTG
CGGTCTTCTCTAACTATTGTCCCATCATCTTTGGTTCCTCGATGCCTCTTTGAACTATGTTCAACGTCCATAAGCTCTTCAGAGTT
TTTGACCGCAGCTTCCCTGGTATCTAAAGTTTTGCAGTGTGGGTTAGGCGTCACGGGTTCTCTGTTATCTTTAAGGTGGCTAGGCA
TCGCTTTGAACCCCGAGCCTCCCTCTTCATGCATTTGTTTACTTGAAGGACTTTCACTGTTGTGATCCAATGGTCCTTCCCCAACT
TTCAGTTTCCATTTACTAGAGCTCTTTTCAAATGAATTCTCCTGTCTCATAATGCCAGTGGTTTTAGTTAGGGGCTCATCTTTTGG
ATCCAGTGGCAGATCATCATTTCTACGAATACTAATCTCCAAGTCTCTACCCATTGTGACATCTTCAATTTTTTCATCCTGTTCTT
GAGTCTCCTTCTCAGCAGGTGCTGCAACCAAGTGATTATTGGGAAACTCGGGGTTTGAATGTACCACTTGTGCGCATGTGCTATCA
ACTCGATCCCATGGAGACACCGCTCGTGGACTGTCGTCAACCTCCACAGCTTTTTTCGTCCAAGAGCTCTGGGCACCGCTCCCATC
ACTGCTTGCATCACTAGCATTCAGGCCAATGCTCCCATTTTCATTCTCACCACTGTGTCCTGAATCGTTGTCAGATTTTATAACAT
TCTTTGATTTCACGGACTTTTGAGTCTGGTGTGTTCCGCTTTCACTTCCACTGCCACTAGAACTTTGACATCTTCTCCAAACATGT
TGCCAAAGGATTTTGAGCTCGTTTTTCCTTATCGGCTTAACTAGAAAGTCAACTGCTCCTTTTGATAAGCATTTAAAGATCAGCCC
CATCGAGTCATGAGATGACATCATGATGACAGGAATGTTGCGGCGAGATTTGTGATTCAAAATCTTGCATAAGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADA58342 pseudo-response regulator 7a [Brassica rapa]25885e-290
BAJ34554 unnamed protein product [Thellungiella halophila]25501e-285
NP_568107 two-component response regulator-like APRR7 [Arabidopsis thaliana]25133e-281
XP_002873067 pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]25106e-281
CAB86035 putative protein [Arabidopsis thaliana]24523e-274

Swiss-Prot top hits (Blast detail)Scoree value
Q93WK5 Two-component response regulator-like APRR725131e-282
A2YQ93 Two-component response regulator-like PRR375245e-052
Q0D3B6 Two-component response regulator-like PRR375211e-051
Q9LVG4 Two-component response regulator-like APRR34134e-039
A2XFB7 Two-component response regulator-like PRR733418e-031

TrEMBL top hits (Blast detail)Scoree value
D2KK88 Pseudo-response regulator 7a25884e-290
D2KK92 Pseudo-response regulator 7b14092e-153
B9HM08 Pseudo response regulator7783e-080
B9HM09 Predicted protein7783e-080
B9SGD1 Two-component response regulator ARR2, putative7631e-078

Arabidopsis top hits (Blast detail)Scoree value
AT5G02810.1 PRR7 (PSEUDO-RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator25147e-284
AT5G60100.1 APRR3 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator4133e-040
AT2G46790.1 APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription regulator/ two-component response regulator2199e-018
AT5G24470.1 APRR5 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator2101e-016
AT2G46790.2 APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription regulator/ two-component response regulator2091e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  60%
 
122  40%

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