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Information for unigene UN08013

FASTA Sequence
Unigene ID: UN08013Length: 630 SSR 
TTTGGAACACTTAAGTTTCTCCATTTTGTAATTGAACATCACACTTTAAAAATTTGCAAACAATAAAAACAAATAAATGCTAAATG
TGATATCAAGTTCAAATCAAAATACAACAAAACGATCACAAGATAGAATCTTATTCTTCAAATGCTTCAGCGATCATGGAAATGAA
AGCACTAAACTTGCCTCCCCCTTCTTCATCCCCACCATCATCTCCTTCTTCTTCTTCTTCTTCCTCCTCCTCTTGTTCTTCTTCTT
CTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCTTCTCCTCCTTCTTCCTGGTTCCCACCGCCTCCATGGTGGCCCTTAGGCTTA
ATCTTCTTGAGGGTGGCTCCGAGACCAACCATCGCCGCAGCTATCTTCTCTCTCTTTGATCCCTCTTTCTTCTTGTCTTCCTCTTT
CTCATCTTTTGAGTGATGGTGGAGGTGGAATATTCCTCTATGTTTATGGGATTTTTCTTTCTTTTTCTCGGGTGATGACTCTCGGA
TGCCTCGTTCCACATGAGCAGTCTCCACGGTTTCATCCAACTGCTTCTCCATCTTCTCTTACTCTTTTTTGCCTTTGTGTTTTTTT
TTTGTTCTGCTTCTAAATCGTTGTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872317 hypothetical protein ARALYDRAFT_489655 [Arabidopsis lyrata subsp. lyrata]5161e-050
NP_198215 glycine-rich protein [Arabidopsis thaliana]4758e-046
AAF88010 Hypothetical protein T10I18.2 [Arabidopsis thaliana]4382e-041
XP_002872316 hypothetical protein ARALYDRAFT_489654 [Arabidopsis lyrata subsp. lyrata]4282e-040
NP_198213 uncharacterized protein [Arabidopsis thaliana]4141e-038

Swiss-Prot top hits (Blast detail)Scoree value
Q7M732 Retrotransposon-like protein 11781e-012
O60721 Sodium/potassium/calcium exchanger 11691e-011
Q12532 Uncharacterized protein YPL009C1573e-010
P13816 Glutamic acid-rich protein1493e-009
Q54F38 Histone H3.v11493e-009

TrEMBL top hits (Blast detail)Scoree value
Q8VXY1 Putative uncharacterized protein4756e-046
Q9LKU5 Putative uncharacterized protein T10I18.24381e-041
Q6IDP7 At5g286104147e-039
Q6TXJ2 LRRGT000071834e-012
D4A2A0 Putative uncharacterized protein ENSRNOP000000408801763e-011

Arabidopsis top hits (Blast detail)Scoree value
AT5G28630.1 glycine-rich protein4763e-048
AT5G28610.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, seed, leaf; EXPRESSED DURING: E expanded cotyledon stage, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT5G28630.1); Has 1909 Blast hits to 1356 proteins in 121 species: Archae - 0; Bacteria - 8; Metazoa - 1295; Fungi - 112; Plants - 60; Viruses - 39; Other Eukaryotes - 395 (source: NCBI BLink).4145e-041
AT5G03710.1 unknown protein1511e-010
AT4G02810.1 unknown protein1483e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  100%

Unigene MembersMember information