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Information for unigene UN08052
| FASTA Sequence |
| Unigene ID: UN08052 | Length: 1132 |
SSR | | GGCTTCAACAACGCTCTCACCTTCAGGTGATCCAGATGAAACTTGTGTAACTTCATCAGATTTGACTTCTTCATTTTCTTGTTCAT
GCTTGTGGATTTGCTCTTTTATTTCTTCTTCATTTTGCTCCAATGGCAAGCATGATTCTTCTTGCAAAAGAGTTAGATCAAGACTC
CTTTCTTCTTGGGATTTTTCTTCAACCTCACTACTTTCTGGTACTGAAACTCTCTCTTGGCCTTCTTCTTTTGTCTCTAATATATA
AGAACCTTCCTCTTGACCTTCTTGATGCGGTGCTATTCTTCTTCTTCTTCTTCTGGTTTTTCTTGGATCTTCTCGCCTAAGGTTTT
GCTTGTTTCCTCAGAAGGTGACTCAATAGATTGCTTCTCAACCAGCTCTGCCTCTGACTCATTCAGTTCTAGACCTCTCTCCATAT
TCTGATCTCCAGCAACATCATCTACCGCCTCTTTCTTCTCCTCCATAACCTCCTCTTTATCTACCTCCAACGCAAGATCTGATGGA
ACTTCTTCGAGTTTCTCTGTTTTCTCTTGTTCTTTCAGGTCCATAACCGTCTCTTTGCTTTCTTTGGTTACCAGAGACTCAGCTTC
AGTTACAAAGATCTCACCCTGTGGCATGCTTCTCTCCAAAACATGTTCGTCTTCTTCGGTATCTTTAGATATTTGTTCTGGTGAGA
GTTTTGGCGGTTCCATTAACGTAATACTTTGTTGCACCTCATCAGATGATGTGACAGTCTTCACCGTCTCTTCTTGCTCCTTCAGG
TCAAGACTCGGTTCTCCAGTACATGTACTGTTGATGTATTTACAGTCTCAGCTTTAGGTACAAGGGTCTCCTCTTGTGGTATATCT
CTCACTAACACATGTTCATGTTCCTCAGTATCCTCTGAAGCTTTCAGTTCAATGTCCTCACCCTGAATTGTCGGCGTTTCGACAAT
CGTAAGACTTTCTGGCACCTCTTGTGCTTTGTGGATGATGATGTCCTCTTCCTTTTCTCTGTCTCCAGTCACCTCATGTGAGACTA
TAGATTCATGAACTGGAGTTTCTTCATTAGATTTTACAGGTTCAGTATCAAGAATGCTTTGGGTCTTGTCTGCTGCTAATTGTTCT
TCTTCCTCATTGGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002728229 PREDICTED: hypothetical protein, partial [Rattus norvegicus] | 153 | 5e-008 |
| EGW04884 hypothetical protein I79_020146 [Cricetulus griseus] | 152 | 7e-008 |
| XP_001914036 serine-rich protein C30B4.01c precursor [Entamoeba histolytica HM-1:IMSS] | 150 | 1e-007 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q75JC9 Uncharacterized protein DDB_G0271670 | 138 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B1N4C0 Serine-rich protein C30B4.01c, putative | 150 | 8e-008 |
| A2EUJ3 Erythrocyte binding protein, putative | 146 | 2e-007 |
| Q9DGL1 Retinitis pigmentosa GTPase regulator-like protein (Fragment) | 145 | 3e-007 |
| Q3MJK9 Cement protein 3B variant 1 | 143 | 5e-007 |
| B6KF59 Putative uncharacterized protein | 140 | 1e-006 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G40450.1 unknown protein | 153 | 2e-010 |
| AT5G40450.2 unknown protein | 153 | 2e-010 |
| AT5G24880.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10660.1); Has 195834 Blast hits to 92446 proteins in 2480 species: Archae - 1007; Bacteria - 19200; Metazoa - 85171; Fungi - 18359; Plants - 7291; Viruses - 1072; Other Eukaryotes - 63734 (source: NCBI BLink). | 142 | 4e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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