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Information for unigene UN08058

FASTA Sequence
Unigene ID: UN08058Length: 992 SSR 
CATCAATCATTCCACAATTCATGTATAATTTATAAATATGGTCAGCAACCAACAGAAAGGGAGAAACATAAAAACAAACACTGGAA
ACCAAATTAGGTAAGAAAAAAAGAATATTAGAACACGTCGGGATGGAAGCGGCCAGGGATGGAACTGTTGTTCTGCTGAGCTTGTT
TCAGATGAAGCGTGAGAGCATAGTTGTTAACCTCCAGAGTTCTCAGCTGTTCCTGGTACTGACTAACCATCTGCCTCAAACCCTGC
AACTCCTGACTCTGATCTTCCGTCTCTCTGCCGCTTCTGTTGCGTCACCACGGCTCGTTTAAGCAAACTATTCTCCTGAACAGCAG
CTTCTAACTGCTGCCTCAGCATCAAGTTCTCCTGTTGGAGACTGCTTTGCAACGCTGCTGCTGCTGCTGCGTCGGAACCAGCACGT
GCGTTGATGGACTTCTCCAAAGCTTCAAGTGCTTTTGAGGCACGGTCTTTGGCGTCGTTCATGTCTGAAGCACTCATCATGATCCC
TGACGGATAAGTCAACCCACTCAGTGCCGTCCAAGTTCAAGACTTGATCATCCTTCCCTGATGGTCCTACTTCAACTTTTGCTTCT
TCTGAATCCTTATTGGCGGATTCTAGACGAAGCTGGTTCAAAGATATAATAGCAGAATCAAGATCATCTCCACATTCCTCGATTGC
TCGCTCAAGAATCTGATGATCCATATCGGGGAAAATGGAGGCGAGGTGACTGAGAAGAAGGGAGGAGGAGAAACGAGAGGAACGGA
GTTTCTTGGAGACAGGAGGAGCGGAGGACAAATCGTCGAAAAGAGATCTCTTGCTGCCGCAAACAATCGCAGACATGTTATCTGCT
TCCTCCCTCAATCTTCTTCTTCCTACTTCAGATCTCACCTTTCCTTCTTTTTTTTTTAAATTTAATTTTCAACTTTCTCAATCTTA
GATCATCTCTCCGATCCGATGATGATTGTCGGAAACCGAACAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAK43955 unknown protein [Arabidopsis thaliana]3524e-031
NP_568521 Ubiquitin system component Cue protein [Arabidopsis thaliana]3515e-031
NP_001119304 Ubiquitin system component Cue protein [Arabidopsis thaliana]3515e-031
NP_001190418 Ubiquitin system component Cue protein [Arabidopsis thaliana]3032e-025
XP_002868389 hypothetical protein ARALYDRAFT_493566 [Arabidopsis lyrata subsp. lyrata]2475e-019

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q94K99 Putative uncharacterized protein At5g324403523e-031
B3H6U1 Uncharacterized protein At5g32440.23513e-031
Q8H1Q3 Putative uncharacterized protein At5g324403513e-031
A9PHI2 Putative uncharacterized protein2278e-017
B9HA90 Predicted protein (Fragment)2278e-017

Arabidopsis top hits (Blast detail)Scoree value
AT5G32440.1 LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1); Has 303 Blast hits to 289 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 74; Fungi - 21; Plants - 93; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).3512e-033
AT5G32440.2 LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3512e-033
AT1G80040.1 unknown protein1532e-010
AT5G02510.1 unknown protein1406e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  100%

Unigene MembersMember information