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Information for unigene UN08081
| FASTA Sequence |
| Unigene ID: UN08081 | Length: 875 |
SSR | | GATCCTCTGATTTCGCTGGATTCAGCTGTACTATCCCTCACAAAGAAGCTGCGTTGAAATGTTGTGAGAGGTTGATCCATTGGCAA
AGTCTATAGGAGCTGTGAACACTATACTAAAGAGACAAAGCGACGGAAAGTTGCTGGGTTACAACACGGATTGTATTGGTTCCATT
TCTGCTATTGAGGATGGGCTTAGAAGGTCAATTGACCCTAGGAGTGTACCTTCTTCTTCTTCTTCGCCGTTGGCTGGTAAAACAGT
GGTGGTTATTGGTGCTGGTGGAGCAGGTAAAGCACTTGCTTATGGTGCAAAAGAGAAGGGAGCCAAAGTTGTTATTGCTAATAGAA
CTTACGAACGAGCAGTAGAACTCGCAGAAGCAATTGGAGGAAGAGCGTTATCTCTCAAGGATTTAGATAACTTCCACCCAGAAGAT
GGCATGGTATTGGCCAACACAACGTCTATGGGGATGCAACCAAATGTTGATGAGACTCCCATTTCCAAAGATGCATTGAAGCACTA
CGCACTAGTGTTTGATGCGGTTTATACTCCAAGAATCACCAGACTGGTAAGGGAAGCAGAAGAATGCGGAGCAATAACAGTGTCGG
GCTCAGAGATGTTTGTGAGGCAGGCTTACGAGCAGTTTGAGATTTTCACCGGTTTGCCCGCTCCAAAGGAACTCTACTGGCAAATC
ATGTCAAAGTACTGAGACCTCGCTTTTGTGTGTGTATGTGTATTTTCTTCTTCCATGGAAACTCAATTCCAATAATTTTTTTTTTA
AAAAAATGCTATTTGTGTTCCAGAGAAGACCCTTTGTGATACCATAGCCTGGACTTCTCTCTGTATTTTTATATATACAAGCGATA
AAACTTGTTGAGTCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884573 EMB3004/MEE32 [Arabidopsis lyrata subsp. lyrata] | 997 | 5e-106 |
| AAW63134 dehydroquinate dehydratase/shikimate dehydrogenase [Arabidopsis thaliana] | 989 | 4e-105 |
| NP_187286 Shikimate dehydrogenase [Arabidopsis thaliana] | 989 | 4e-105 |
| 2GPT Chain A, Crystal Structure Of Arabidopsis Dehydroquinate Dehydratase- Shikimate Dehydrogenase In Complex With Tartrate And Shikimate | 989 | 4e-105 |
| AAS76684 At3g06350 [Arabidopsis thaliana] | 983 | 2e-104 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SQT8 Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic | 989 | 2e-106 |
| Q46DZ6 Shikimate dehydrogenase | 343 | 1e-031 |
| Q2RI72 Shikimate dehydrogenase | 301 | 1e-026 |
| B9LSZ3 Shikimate dehydrogenase | 280 | 3e-024 |
| B0R386 Shikimate dehydrogenase | 279 | 4e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q30D00 Putative 3-dehydroquinate dehydratase/shikimate dehydrogenase | 799 | 3e-083 |
| B9HSF2 Dehydroquinate dehydratase/ shikimate dehydrogenase | 781 | 4e-081 |
| A7XEE1 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase (Fragment) | 775 | 2e-080 |
| B9RSY7 Shikimate dehydrogenase, putative | 755 | 4e-078 |
| O65917 Dehydroquinate dehydratase/shikimate:NADP oxidoreductase | 744 | 7e-077 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G06350.1 MEE32 (MATERNAL EFFECT EMBRYO ARREST 32); 3-dehydroquinate dehydratase/ NADP or NADPH binding / binding / catalytic/ shikimate 5-dehydrogenase | 990 | 1e-107 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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