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Information for unigene UN08094

FASTA Sequence
Unigene ID: UN08094Length: 1045 SSR 
GGGTGAAACCAAATAAACCAGTATTATTAAAACTGAACCAATTACAAACGAAAACCTGAAACCCAAGTACATCAGATCAGCACATA
AAAGGCAAAAAGATCTGCATACAAAGATAAGATTTTGATTATAGGTATTCAAAGCAAAAGTTTTATCACAAAGTTTGGCAGCATGG
AAGAACAATATAACCGACCAGAGAAATATCCTTTTCTAATGGGACTGACAGGCAAATCACTCCAGCTTAACTCCGTAGACTCATAT
CTAATGGGGGCTGACAAAGCAACTTGTCTTTTGGATCTTGTTCTGACTTAGCGGAAAAGACGTGGAACAGATCGTTTAGGTACTTT
GCCTTCGAGCTTAAGTCTCCTATAAGACTCTCTGATATGGCAAGGTCTGATAGGACCTGAGTCGTTCCTTTCCCCCATTACAACTC
TAGCTGTTTCCACTAGTTCACCAACAAACATCTTTGCGATGCCACAGTTCACAATTATAACTGGCATACTGATCTTCTGACTCCCT
GTCACTCCCTGTAATAACTTCCTCATGTTTCCTTTTTGAAATGCAGATCTCCTAAAAGATTCATATCTGCTCATTTGATCCTCAGT
GAACTGCGACAAAATGACCTGCATTTTGGCCATCTTAGCGGGATCAGCAGTAGTTGGATACTTGGTTAGCTCAGCTTCCATATTCT
CTTCCTCTTCTTCTTCATCTTCATCTTTGTTCTTCCCTTCAGCAACAACAACAACGGAGGAGGAGGTCTTAGATTTCTTGCTCTGA
CGGCGAACACCACCCACGTCTCTCTCACTCTCCTCCGGAGCCTGGTCCATTTCAATCCGTCCCTCGTCATCGCCTCCGCCTCCGGG
TGATTCCGGCGGTGATTCGTCTTGCTCCTCCTCCTCCTCTATCGCTGCTTCAAATGGATCCTTCGAATGCTTCATTTTTCCTTGAA
ACCTTTGATACTCAGATCCAATTTTCAAGAGGCGCAGCGCAACTGGGAAGCTCCAAAAATTTACAGGCGGAGAGAAATTAATGTGG
GATGATGCTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869942 predicted protein [Arabidopsis lyrata subsp. lyrata]8166e-085
NP_193761 transcription initiation factor TFIID subunit D9 [Arabidopsis thaliana]8023e-083
CAA18253 putative protein [Arabidopsis thaliana]5953e-059
XP_002456149 hypothetical protein SORBIDRAFT_03g031220 [Sorghum bicolor]5872e-058
XP_002277017 PREDICTED: hypothetical protein [Vitis vinifera]5837e-058

Swiss-Prot top hits (Blast detail)Scoree value
Q15544 Transcription initiation factor TFIID subunit 112652e-022
Q99JX1 Transcription initiation factor TFIID subunit 112652e-022
Q5RA91 Transcription initiation factor TFIID subunit 112634e-022
Q54XM9 Transcription initiation factor TFIID subunit 112616e-022
Q5U1X0 Transcription initiation factor TFIID subunit 112492e-020

TrEMBL top hits (Blast detail)Scoree value
Q9M565 Putative TATA binding protein associated factor 24kDa subunit8022e-083
O65441 Putative uncharacterized protein AT4g202805952e-059
C5XGR0 Putative uncharacterized protein Sb03g0312205872e-058
B8A7K9 Putative uncharacterized protein5782e-057
Q5QMA1 Os01g0680400 protein5754e-057

Arabidopsis top hits (Blast detail)Scoree value
AT4G20280.1 TAF11 (TBP-ASSOCIATED FACTOR 11); DNA binding / RNA polymerase II transcription factor/ transcription initiation factor8038e-086
AT1G20000.1 TAF11b (TBP-ASSOCIATED FACTOR 11b); DNA binding / RNA polymerase II transcription factor/ transcription initiation factor4247e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
87  78%
 
122  22%

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