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Information for unigene UN08101

FASTA Sequence
Unigene ID: UN08101Length: 1626 SSR 
GAGGGACAGAGATGGAGAGAGAATCAAGCGACATGATGACAGGGAGGATGATAGAAGAAGCAGGGATCGAGACCGACATCACAGAA
GTCGTCACAGGGATCGCAGTGGCGAAAGAAGAGATCGTGTTAGGGGTGATGATGACTACCGTCGTAGTAGTCGTGACCGTGACTTT
GACAGGCGTAGAGATTCTGACAGAGATAGAGGAGGAGATAGACGCCGTCGCCGTTCTCGTTCAAGGGGTAGATCTGAGCGAAGATC
ACGTTCTCCATCAAAGACTAAGCGGGTCAGTGGATTCGACATGGCACCTCCAGCTGCTGGGATGTTAGATGCTGGTGCTGCTCTTA
CAGGCCAAGTTCCTGCTCCAATCCCAAATCTTCTTCCTGGAAATGGAATGTTTCCTTTACAACCTGGACAGCAATTCGGAGGAGTC
CCTATGATGCCTATTCAGGCAATGACACAACAGGCTACTAGACATGCTCGGAGGGTCTATGTTGGTGGCCTTTCTCCCTCAGCAAA
TGAACAGTCTGTTGCGACATTTTTTAGCCAGGCTATGGCTGCTATTGGCGGAAACAGTGCTGGTCCAGGTGATGCTGTTGTTAATG
TGTACATCAACTACGAGAAGAAATTTGCATTTGTGGAGATGCGATCCGTTCAAGAAGCCAGTAATGCAATGACTTTGGATGGAATT
ATATTTGAGGGAGCTCCAGTAAAGGTGAGGAGACCGAGTGACTATAACCCAGCGCTGGCTGCAACCCTTGGTCCAAGCCAGCCCAT
TCCAAATTTAAACTTGGCTGCTGTAGGTCTGACTCCAGGGGGTGCTTTCGCTTGAAGGCCCAGACCGTCTTTTTGTTGGTGGACTT
CCTTACTATATCCCTGAGTCACAAATCAGAGAGTTGTTAGAGTCCTTAGGAGCCCTGAAAGGTTTTGATCTTGTAAGAGACAGAGA
AACAGGAAACTCAAAAGGATATGCATTCTGTGCGTATCAAGATCCCGCAGCTACAGACATTGCATGCGCTGCCCTCAATGGAATTA
CCATGGGAGATAAAACTCTATGTGTAAGGCGAGCTAACCAAGGAACAGCTCAAACGAAACCTGAACAGGAGAATGTATTGTTGCAC
GCACAACAGCAAGTTGCTTTCCAGAAGATTATGCTACAACAGGGAGCAGCAGCAGCAGCAACCAAAGTTGTGTGCCTGACTCAAGT
AGTTACAGAGGACGAGCTTAGAAATGATGAGGAGTACGAAGACATTGTTGTAGACATGAGAGATGAAGGCGGAAAGTTAGGTGCGT
TAACTAAAGTCGTGATCCCTCGCCCCAGCTCCAGTGGTGAGCCCGTTCAGGGTGTTGGAAAGGTGTTTCTTGAGTATGCGGAAACA
GAGAGCTCGAACAGGGCAAGAAACGGTATGAATGGTAGGAAGTTTGGAGGGAACGAAGTGGTGGCTGTGTTTTACCCTGAAGATAA
GTTTGAACAAGGCGATTATTCTCTCTAAGATAGTATATTTTAATTCTTCAAATAACTTTTTATAAACCATTTACTTGTTTGTGTTG
TATCAAGACAACGAAGGATCCACATATTACAATGCTTGTTACCTTTTATTTACCAAACGAAGGCATTCTTTTGGTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866997 hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp. lyrata]9791e-103
BAH19725 AT4G36690 [Arabidopsis thaliana]9763e-103
NP_974695 Splicing factor U2af large subunit A [Arabidopsis thaliana]9711e-102
NP_195387 Splicing factor U2af large subunit A [Arabidopsis thaliana]9711e-102
NP_849509 Splicing factor U2af large subunit A [Arabidopsis thaliana]9711e-102

Swiss-Prot top hits (Blast detail)Scoree value
O23212 Splicing factor U2af large subunit A9715e-104
Q9ZR39 Splicing factor U2af large subunit A9142e-097
Q9ZR40 Splicing factor U2af large subunit B8991e-095
Q8L716 Splicing factor U2af large subunit B8551e-090
Q2R0Q1 Splicing factor U2af large subunit A8434e-089

TrEMBL top hits (Blast detail)Scoree value
B9DG58 AT4G36690 protein9762e-103
A5BUJ8 Putative uncharacterized protein9413e-099
A9XLE6 Putative uncharacterized protein9305e-098
A9XLG6 Putative uncharacterized protein9261e-097
A9XLD1 Putative uncharacterized protein9215e-097

Arabidopsis top hits (Blast detail)Scoree value
AT4G36690.1 ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding9894e-107
AT4G36690.3 ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding9894e-107
AT4G36690.2 ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding9894e-107
AT1G60900.1 U2 snRNP auxiliary factor large subunit, putative8551e-091
AT1G60830.1 U2 snRNP auxiliary factor large subunit, putative3783e-036

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  40%
 
122  40%
 
101  20%

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