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Information for unigene UN08104
| FASTA Sequence |
| Unigene ID: UN08104 | Length: 796 |
SSR | | GGATCTGAAACAACAACAAACCTCTCTGAGATTTCGCCAGAGTTAAAGAGAGAGAGAGAGAACGATCCAGCGGTTGAGATGTTCTT
ACGGGCAATCGGACGGCCACTGTTGGCCAAAGTGAAGCAGACGACAGGGATCGTCGGGCTCGACGTTGTGCCGAACGCGAGGGCGG
TGCTGATCGATCTCTACAGCAAAACCCTAAAGGAGATCCAAGCCGTGCCGGAGGACGAAGGATACCGAAAAGCGGTGGAATCGTTC
ACGCGCCACCGTCTCAGTGTCTGCAAAGAGGAAGAAGACTGGGAGGCGATCGAGAAGCGTCTTGGCTGCGGTCAGGTGGAGGAGCT
CATCGAAGAGGCGCGAGACGAGCTCATACTCATTGCCAAAATGATCGAATGGGACCCTTGGGGTGTTCCGGATGACTACGAGTGTG
AAGTGATTGAAAACGATGCACCGATTCCAAAGCACGTTCCTCAGCACCGACCTGGTCCTCTTCCTGAGGATTTCTACAGAACCCTT
GAAGGTCTTCTCTCGGAGTCCAAGACAAAGATCCCAGCTGCTAGCTCTGCTGATGCGCAGCTGAAGGAGTAACTTCCAGTATTACT
TTGTTTTGTACTTCTTGCTTTTTTTTTTGGGCTAGTGTTTGTTTCTGAGGCCAACTAAGAAAATTGCGTAATAATTTTGGAAAACA
ATAGCAATGTCACTCTTTTCATAAATGTTTTATCATTCTTCTCAAAAACCAATGATAATACAAATGATGTTTCTTCCCCAGTGGAA
TAACATTATGGACTTGCTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864198 hypothetical protein ARALYDRAFT_495348 [Arabidopsis lyrata subsp. lyrata] | 838 | 1e-087 |
| NP_568778 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 5 [Arabidopsis thaliana] | 820 | 1e-085 |
| XP_002276087 PREDICTED: hypothetical protein [Vitis vinifera] | 706 | 2e-072 |
| XP_002513634 NADH dehydrogenase, putative [Ricinus communis] | 706 | 2e-072 |
| XP_002327504 predicted protein [Populus trichocarpa] | 698 | 2e-071 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FLX7 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial | 820 | 6e-087 |
| Q559Z4 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 211 | 3e-016 |
| P0CB99 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 178 | 2e-012 |
| Q18359 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 172 | 9e-012 |
| P80266 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (Fragment) | 145 | 1e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B9RIR5 NADH dehydrogenase, putative | 706 | 2e-072 |
| B9MX65 Predicted protein | 698 | 1e-071 |
| A9P8K8 Predicted protein | 697 | 2e-071 |
| C6T2Y2 Putative uncharacterized protein | 689 | 1e-070 |
| Q8W544 NADH-ubiquinone oxidoreductase (Fragment) | 622 | 9e-063 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G52840.1 NADH-ubiquinone oxidoreductase-related | 821 | 4e-088 |
| AT4G28005.1 LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-related (TAIR:AT5G52840.1); Has 20 Blast hits to 20 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 189 | 8e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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