 |
Information for unigene UN08113
| FASTA Sequence |
| Unigene ID: UN08113 | Length: 598 |
SSR | | GGCAGCTCACTTTGATGTATAACAAACAGTCTACATGTTTATAATACAAAAGCATCTGAGAATATTTTAAATATGCATCAAGCATA
GTGTTGGCAATAACGGTTATGTTTTTATGATTTATAACAACAAATTAGCAATTTGAATATGTGTACTAAGACACGAGACACAGTCT
CAATAACAAAATCTAAACAACTCGGAATGTTTTCTTTGGGCTATTCAAATGTATTGAACAGTGATGTACTGCTTAGTACACAACAA
CGCCAGTACCCTCTCTCTCATTACATAATATTTGTATTCGTGTTCATCAGCTCTCATCCTGGCCATGGAATGGCTTCTGTTTTCTC
ACCTCCGCAGTTCCATTTTGTTGTTCCTGCTGTCGAAGACGGTGATGCATAAGCTGTTGTATCTGTTGCTGTTGAAACTGAAACTG
CTGCTGTTGTTGTTGTTGTTGTTGTTGATGTTGATGCTGTTGTTGTTTCTGTGAATGAAGCTGCAACTGCTGGAGCTGTTGTGCGG
CTAAGATTGTCTGCATTGACTGATTGTTGGAATAGAACTGCTGGTTTGATCCAAACGACCCATAGTTCATCGCTGATGCTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172097 putative basic-leucine zipper transcription factor bZIP69 [Arabidopsis thaliana] | 341 | 3e-030 |
| AAM62924 transcriptional activator RF2a, putative [Arabidopsis thaliana] | 341 | 3e-030 |
| XP_002892318 hypothetical protein ARALYDRAFT_887800 [Arabidopsis lyrata subsp. lyrata] | 333 | 2e-029 |
| NP_180695 putative transcription factor PosF21 [Arabidopsis thaliana] | 331 | 4e-029 |
| XP_002879324 hypothetical protein ARALYDRAFT_482066 [Arabidopsis lyrata subsp. lyrata] | 325 | 2e-028 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q04088 Probable transcription factor PosF21 | 331 | 2e-030 |
| Q69IL4 Transcription factor RF2a | 176 | 2e-012 |
| Q54BD4 Signal transducer and activator of transcription C | 173 | 4e-012 |
| Q9Y0C9 Ras-interacting protein RIP3 | 172 | 5e-012 |
| Q54DK4 Alpha-protein kinase 1 | 169 | 1e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LDZ9 Transcriptional activator RF2a, putative | 341 | 2e-030 |
| Q9LNE0 At1g06070 | 341 | 2e-030 |
| B9DGB1 AT2G31370 protein | 331 | 3e-029 |
| B9MY63 Predicted protein | 242 | 5e-019 |
| B9SU10 Transcription factor RF2a, putative | 228 | 2e-017 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G06070.1 bZIP transcription factor, putative (bZIP69) | 341 | 1e-032 |
| AT2G31370.3 bZIP transcription factor (POSF21) | 332 | 1e-031 |
| AT2G31370.2 bZIP transcription factor (POSF21) | 332 | 1e-031 |
| AT2G31370.1 bZIP transcription factor (POSF21) | 332 | 1e-031 |
| AT2G31370.4 bZIP transcription factor (POSF21) | 332 | 1e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
