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Information for unigene UN08142

FASTA Sequence
Unigene ID: UN08142Length: 1045 SSR 
GGACGTTTCTCTTTCTTCGTTCCGTGGCCCAAAGTCTCTGAAACTTTCTCGACCTCTCTCTCTCTAATCTCTCCCTGAAAAGAACC
CTCTCTTTAATGGATACATCGCCTCTCCGATCTCATTCCTCAACGTTCTCCTCAAGACTTTTGTTGCTCTTCTTCTGTAGTATTCG
TGCTTCTTCTGTTTCCCATCGTAATCCTTGTAATTGACTCGGAAGCTCTATAACTTGCACCGCTTCGTTGAATAGTTGATTTTGGA
TTTGATATAGGAAAAAACCATGGGGAGGAAGTCTCAGCGTAAGAATGTCCCCATGGATTTGTTTGATAGTGATGATGATACAAGTA
GTATAAGCTCTTCCTCCACCCTGCGGTCTGAGAGGCCGACCGGCATGGATGAAGTTCAGGTTCACAAAGATGTTTTGTTGGATCAA
TCTCTCGATGCTCTCTATGAGAAAAGGAGTTCAACGAGAGAGCAGGCTTTAGCCTCCATTGTTGATGCTTTCAACAGCGACTTGCA
GCTTGAGTTTGTCGAAAAGAAGTTTGCCACTTTATTGCATCAGTGTTTACACTGCACCAAGAAGGGGTCCAGCAAGGAGACCTCTT
TAGCATCACATGTTATTGGGTTGCTAGCATTGACTGTTGGACTTGGGGATCAAGCTCAAGAGATTCTTGAAGAATCCGTCACTCCT
CTTTCTCAGGCCCTTAAATCTGGCCGTGAATCCTTGAAAATAACCTCCATTCTTGAGTGTTTAGCAGTCATTACCTTTGTTGGTGG
GACCAATTCGGAGCAAACTGAGAGATCTATGCAAATAATATGGCAAATGATTCACCCCAAACTAGGTTCTAATGTCGTTGCGACCA
AACCTTCACCTGCTGTGATAACTACTGTTGTCTCTTCCTGGGCGTTTCTGCTCACAACAGTTGACCGATGGGCCCTAGTCCCAAAA
TTTGGCAAGAGACCGTAACTTATCTCTCCTCACTGTTGGAAAAGATGACCGATCTGTTCGTATAGCTGCTGGTGAAGCGCTTGCTC
TGATATTTGAGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890749 hypothetical protein ARALYDRAFT_472983 [Arabidopsis lyrata subsp. lyrata]9653e-102
NP_973923 Interferon-related developmental regulator domain-containing protein [Arabidopsis thaliana]9521e-100
NP_564294 Interferon-related developmental regulator domain-containing protein [Arabidopsis thaliana]8982e-094
NP_849715 Interferon-related developmental regulator domain-containing protein [Arabidopsis thaliana]8767e-092
XP_002510104 conserved hypothetical protein [Ricinus communis]7754e-080

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q3ED57 Putative uncharacterized protein At1g27760.39527e-101
Q9ASX8 At1g27760/T22C5_58981e-094
B9R711 Putative uncharacterized protein7752e-080
Q9SFY3 T22C5.216902e-070
B9GNQ1 Predicted protein (Fragment)6874e-070

Arabidopsis top hits (Blast detail)Scoree value
AT1G27760.3 interferon-related developmental regulator family protein / IFRD protein family9524e-103
AT1G27760.1 interferon-related developmental regulator family protein / IFRD protein family9193e-099
AT1G27760.2 interferon-related developmental regulator family protein / IFRD protein family8843e-095

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  67%
 
112  33%

Unigene MembersMember information