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Information for unigene UN08154

FASTA Sequence
Unigene ID: UN08154Length: 2200 SSR 
GCACAAACTACGCCCCGGTTTTGAAAGCACTAAGAAGAGCCAAGAGTCGTGGGTTTTCAGACATTCTTTATCTGGACGCTGTCAAG
AAGAAGTATCTTGAGGAGGCTTCTTCTTGCAACGTCTTTGTTGTAAAGGTAAATAATAATATTACATATACTGCGAACTCTATTTA
GCTTAATCTTCCTAATATGACTAGTTCAGGGTCGGACAATCTCAACTCCTGCTACTAGTGGAACAATCCTAGAGGGGATTACTCGG
AAAAGTGTGATGGAGATCGCAAGTGATCAAGGTTATCAGGTAGTAGAGAAGGCAGTTCATGTGGATGAAGTGATGAATGCAGATGA
AGTTTTCTGCACCGGAACTGCTGTAGGAGTTGCTCCTGTGGGCACTATAACATATCAGGACAAAAGAGTAGGGTATGAAACTGGGG
ATGAATCTGTCTGCCAGAAACTGCGTTCGGTTCTTGTAGGTCTTCAGACAGGAACCATTGAAGATACCAAGGGATGGATTACATGC
ATCAACTGAGAAACCAGTACTTATCAAACCTTATACCACAGAGAGATTCACTCTGCATTTTATCAAAGCTGTGTATACACAAAAAT
GAAGAAGTCTGTGTAAATCTATAATAAAATAAAATATATTCTCATATTCACTTGGATAATGTAAAAATAAAATGTATTCTGATTCC
ATATTTTAATAAATGCATTCTTGGTTGAGAAAGAAAAAAAACAACTGAGAATCCAAATCATTCTTGTTTTTTTTCAAAAGAAAGAA
TAATAACATGGAAGAACAGATATAATACTTAGGGCCAAAAGCCTTTCTTCTATACAAACTCTTTCTCTCTTCAAGTTTTCCTTGAA
CTCATCATACTTGGAAGTACTAGAGCTCTGGTTTCAATGGACCTAAGAAAAGAAGAAACTATCAATAAAGAAAGAGAGATGAAACC
GGGGCTTCTAGCTCAGTTGGTAAAGGGTTCACAGCTGTGAGTTCCGCCATCTGGGTTCGAATCCCGGCCACTGGGGAATTAACATT
TCGGCATCGCCAGGGACAGAGGACCGACATGTGGCAACACATGACTAGTCTGGACCACTTCTGTGGGGTCAGGATACCTCCCATTT
GGTAGAGGCCTTGTAATTCACTCTCTAGTGTTGTTGTCTGAGTTAATGAGTTGTATTGTGGAGTTGTGGTGGTAGAAATGTTCTGC
ATCGTCCCTTGAAAACCGGTGAAAGGATTCAGCCCCAGAGTAGGAGTGTTTCTGTCTCTTGGTTGCAGAAGCTCAACCTGCTGTTG
CAATGACTGAACATAGTTGATGATTTCATCAAGCATAACCGCTTTGCCAGTGATCTTGTTGCATCCAGGAACAAGCTCTTGAAGCA
GTCTCATCCTTTCACTGATCTTTTCTCTTCTAACCCTTTCTGCAAGACTGTGACTATTAGTGGCTTGACCTCTTCTTGCCCTCATA
TGAATGTAGTTTTCTTTAGGTGCTTCTTCGCTCTGTGAGCTCTCTTTGTTCATCATCTTCTCTTTACTCTGTTCATTTTTGTGTTT
CTTCTGACTCTGAGGGTCTTCTTGAAATTCCTCCACAGCTTTCTTGTTCCATTGTGATTCGGCTACTGGTTGCCTTCTTTTTCTGT
TTGAGGAACCACCACCACCACCAACAACAACATCATCTGAAACCTGGCGACCATCTCCAGCTCTGATCAATCTCCCAACACTTTCA
TCTCCCTTGTCTGAACCAAGAAACTGACCACCACCACCACCTCCACAATCACCAAACGGACCAAGACTAGCAGGCATGTCATGGTA
ACCAGAACCAGAACCGGTTTGGTAATGAGGGAAGCAACTCATCCCTGGATTATCCATAGCCACCATTGAAGGGTAATGAGAGCTAG
AGAAGCCACCACCACCAACACCAACACTGACAACTGGATCCCAATCTGCAGAAGAGAAGAAAGGATCTACCTTTGCATACAAAGGC
ATCCCAACTCTTGAGATCCCATTTTGATCATCTCCATGGTTTAGCCCCATCTCACCTTCATTAGTCTCTCCACCCATTTCCTTCTG
ATTCAAACCCTCAAAAACAAACTTCAACTTGGTTTGCTTCTTTGCAACGATGCAGCAGAAGCAAGTCACTCACAGTTTTCTTTAAG
GGAAGGGAAGAGAAAGAGAACTCTCTGAGGATAAATGCTTATTCGTCGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892548 hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp. lyrata]9846e-104
NP_172483 transcription factor bHLH74 [Arabidopsis thaliana]9667e-102
BAF02146 bHLH transcription factor like protein [Arabidopsis thaliana]9622e-101
BAF01172 bHLH transcription factor like protein [Arabidopsis thaliana]7955e-082
NP_001031016 branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana]4962e-047

Swiss-Prot top hits (Blast detail)Scoree value
Q6NKN9 Transcription factor bHLH749663e-103
Q9M439 Branched-chain-amino-acid aminotransferase 2, chloroplastic4969e-049
Q9C670 Transcription factor bHLH763661e-033
Q9CAA9 Transcription factor bHLH493562e-032
Q93Y32 Branched-chain-amino-acid aminotransferase 1, mitochondrial3481e-031

TrEMBL top hits (Blast detail)Scoree value
B9DHH5 Branched-chain-amino-acid aminotransferase4961e-047
Q2V4P2 Branched-chain-amino-acid aminotransferase4961e-047
Q56WQ7 Branched-chain amino acid aminotransferase-like protein4943e-047
A3FM28 Basic helix-loop-helix protein3966e-036
C6TLT9 Branched-chain-amino-acid aminotransferase3931e-035

Arabidopsis top hits (Blast detail)Scoree value
AT1G10120.1 DNA binding / transcription factor9662e-104
AT1G10070.1 ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic4976e-050
AT1G10070.2 ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic4976e-050
AT1G10070.3 ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic4976e-050
AT1G26260.1 CIB5 (CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 5); DNA binding / transcription factor3669e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  25%
 
211  13%
 
201  13%
 
74  50%

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