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Information for unigene UN08193

FASTA Sequence
Unigene ID: UN08193Length: 2192 SSR 
GGAAGACTAATGGTGTGTCTGTGTGTGTGTGTATGATAACAAGCTTGTGGCATTGTAATTTAGATATGACTGATTCAGTTATTTCT
TTGTTTTGATATTTTTGGCAGGAGCATCATGTCAAAACATGCCACGGTTTAGTTTCAGTTGTAGTCTATGGAGACCAAGAGAAACC
AGCATTGATCACTTATCCAGATGTAGCATTAAATTACTTGTCTTGCTTCCAAGGACTGTTTCTCTGCCCTGAAGCGGTGTCCTTAC
TCCTCCATAACTTCTGCATCTACCATATTAGCCCCCCTGGACATGAGAGTTTTTGTAGTTCGGAGCTGCTCCAGTTTGTTCCAATG
ATCCTTCGCCTTCTGTTGAAGACCTCGCCGACCAGATTCTTGAAGTATTGAACTTCTTTAGCCTGGAGTCAGTGATTTGCATGGGG
ATCACAGCTGGTGCCTACATCCTCTCCTTATTTGCTATAAAACATAAAGATCGAGTTTTGGGTCTGATTCTGATATCGCCTCTATG
CAAAGCACCCTCATGGTCCGAATGGTTTTATTACAAGGTAGTGTCAAACTTGTTGTACTATTATGGCATGTCTGGATTGTTAAAAG
ATCGTTTCCTTCAGAGGTACTTCAGTAAGGAAGCTCGTGGGAGCTCTGATGTTCCGGAGCGTGATGTAGTACATGAATGCAGAAGG
CTGCTTGGCGAAAGACACGGTATTAGCCTGCGGAGGTTTCTGGAAGCAATCAACAGGAGACATGACATAACAGATGGGTTGAGGAG
TTTGAAATGTCGTACACTCATATTTGTTGGTGACCAATCTCCTTTCCACTCTGAGACTCTTCACATGGTGGCTGCATTAGACAGAA
AATACAGCGCCTTGGTTGAGGTGCAAGCTTGTGGATCAATGATGACAGAAGAGCAACCACATGCGATGTTGATACCAATGGAGTTC
TTTTTCATGGGCTTTGGGTTGCATCGGCCTGGTCGGGTTAGTGATAGCCCTACGAGTCCACTCAGTCCGTCGTGAATTTCCCCAGA
GCTTCTGTCTCCGGAGAGTCTTGGTTTGAAGCTGAAGCCAATAAAGACTCGGGTTCCCACCACGAAATGTTAAACCAAACATTGAT
TCATTTTTTTTTCTCATATTCTTTGATTAAATTGTATTTGTTGTTGTACTCTCTTATATGTAGTCGGATTAAACTCAAAAAACACT
TTTATGTAGTAAGAGATGGTAGTTTTATGGGTTCGTTTCGTATCATTACAAAACGTTGAAGATTGTTTCTAAAAGTTTGTTTCAAA
AAGCAAACTAAGAAAAATAGAATTTCCTACCTTTTTTACCCAAAAAAAGAAAAAGAATCACAAAACATTAAAAGAAAAATGAAGCA
AAGTTACAAGTCTTCGTGTAAGAAATTCATTTTATACAGTTACCACTTTGGTTTTCTCCTGATCTCGCGAAACATCTATACATCCT
GGAACACAATCGAGTGTTCCCTCATTCATTGCCTTTTTGCCTTAAAGCTTTAGAGATCAAATGTGGCTTTGATGTTGTACTGAGAA
ACATCATCAAGAATCGTGAAGAGAACCTTGGATCATTAGTGATATACGCTTTGCACTCTCCAAAATGATACAAATCTCCTTTTAAA
CCAATCTCAGTTGAGTTATCTGGAGAGAACCACCGTAATAGCACTCCTAAATGTACAACGGCCGGTATCAATTTGAATAGAAATGG
TGTCGTTACCAAGCTTAAAGCAGTTGTTCCCAGGAGCAGGAGGTACAGTTTGCTCTCAATTAGGTGAAGATTAGATGCTCGACTTA
GCAGAACAAAAGCAAATTCCCCAATCTGCGCAAGTGACATTCCAACAAGTACTGCAGTTCTGTTATTGTATCCAAAGACTTTCACA
ACAATTGCAACTACCACGGTCTTTATCACTATCACCAGTAACACTGCTGCTACCAAGATGTCAACATGGTTCCACAAGAAGTGCAT
ATGTATCAACATTCCAATACTAGCTAGGAATAGTGCTGCAAAAAAATTGCGGATGGGTTCCACTTGTTCAAGAGTGTGCTGAGCAA
GATCAGTTGTTGAGATCATCACTCCCGCCGCAAAGGAACCCAACTCCAGACTTAAACCGAGCTTGTCACTACACCAAGCGACAAGC
AAGCAAAATGCTACAGCTGCCAACTGGTAGAGCTCGTTAGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179552 N-MYC downregulated-like 3 protein [Arabidopsis thaliana]12776e-138
NP_001077918 N-MYC downregulated-like 3 protein [Arabidopsis thaliana]12776e-138
XP_002883979 ndr family protein [Arabidopsis lyrata subsp. lyrata]12661e-136
XP_002330491 predicted protein [Populus trichocarpa]10213e-108
NP_200486 N-MYC downregulated-like 1 protein [Arabidopsis thaliana]10195e-108

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZUN3 K(+) efflux antiporter 49377e-100
O23969 Pollen-specific protein SF218265e-087
B5X0N6 K(+) efflux antiporter 68132e-085
Q8VYR9 K(+) efflux antiporter 57442e-077
B4SUV7 Glutathione-regulated potassium-efflux system protein kefB2558e-021

TrEMBL top hits (Blast detail)Scoree value
A8MRP5 Uncharacterized protein At2g19620.212774e-138
Q9ZUN1 Putative SF21 protein (Helianthus annuus)12774e-138
B9N5G7 Predicted protein10212e-108
Q9FJT7 AT5g56750/MIK19_2210193e-108
C6THK5 Putative uncharacterized protein9962e-105

Arabidopsis top hits (Blast detail)Scoree value
AT2G19620.1 Ndr family protein12791e-140
AT2G19620.2 Ndr family protein12791e-140
AT5G56750.1 Ndr family protein10192e-110
AT2G19600.1 ATKEA4; potassium ion transmembrane transporter/ potassium:hydrogen antiporter9376e-101
AT5G11790.1 Ndr family protein8741e-093

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  50%
 
71  25%
 
101  25%

Unigene MembersMember information