 |
Information for unigene UN08194
| FASTA Sequence |
| Unigene ID: UN08194 | Length: 1721 |
SSR | | GGAGAACAAGACAGACAGACAACACGAAAGAAAAACAAAAAATCAAAATGGCGGTGAAGAAGAAATCTCTTGGAGATCATTAGTCG
CTAGCTGTTTAGGGGATCCAGATATCACAATGGATCCTCCACAGAAACCCAAGAGAAAAGATGAGGTCATCAAGAAACAGAGCTCG
TTTCAGAGACTATCGGTTCTTGATTTGAGCAACCCGAGTTCCAACACTTTATCAGAAGACTTATCGATTTCTCTCGCTGGCTCAGA
TCTTCACAAATTCACGCTCGGCGAGCTAAAAGTCATTACACAATGTTTTTCCTCAACCAACTTCCTCGGTGAAGGAGGGTTTGGTC
CTGTTCATAAAGGATTTGTTGATGATAAGCTTCGTCCTGGTCTTAAAGCTCAGCCTGTTGCTGTTAAATTGCTCGATCTTGAAGGT
CTTCAAGGTCACCGTGAATGGCTGACAGAAGTCATGTTTCTCGGACAACTTAAACACAAAAATCTTGTGAAACTGATTGGCTATTG
CTGCGAGGAAGAACATAGGACTCTTGTTTACGAGTTTATGCCTCGTGGAAGCTTAGAGAATCAACTTTTCAGAAGATATTCAGCGT
CGCTTCCATGGTCAACGAGGATGAAGATCGCTCATGGAGCTGCAACGGGTCTTCAGTTTCTTCATGAAGCAAAAAATCCTGTAATA
TATCGGGATTTCAAAGCTTCCAATATCTTGTTAGATTCGGATTACACAGCTAAACTCTCTGACTTTGGATTAGCCAAAGACGGACC
AGAAGGAGACGACACGCACGTTTCAACGCGCGTGATGGGCACGCAAGGTTACGCAGCACCTGAATACATCATGACCGGTCATCTAA
CAGCGAGGAGTGACGTCTATAGCTTCGGAGTTGTGTTACTCGAGCTTTTGACCGGTAGGAGATCAGTAGACAAGAAAAGATCTTCA
AGGGAACAAAATCTTGTGGATTGGGCTCGTCCAATGCTCAAGGACGCTCGTAAACTTGAGTGGATCATGGACCCGAGGCTTGAAGG
TCAATACTCAGAGACAGGTGCAAAGAAAGCAGCGGCTTTGGCTTACCTGTGCTTAAGCCATCGACCCAAGAACCTTCCTTGTATGA
GCACGGTCGTCTCTATCCTCAACGATCTTAAGGACTATAATGATATTCCCATGGGGACATTCACTTACACGGTTCCGAACACTCCC
GAGAAGTCTGTTTCCGATAATAGAGAAGACGAAGGTCGTGTTAGGGAAAGTAATAAGCCTCGTAAGAGTCATCATCATCGAGAAAA
CAATCATCATCGATCATCGCCAACAGCTAACTCTCCTAGGACTAAGTCTCCAACACCTAAGTCGCCCGGTGGAGGAAACCACCGGA
CAACTTTGAGAAATGGACTGAACTCGCCTATGAGAAGTGAGGCTGGTGGCGAACGGTACTAAGTTTTCTGGTCTCACCTACTCTTC
AAATTATTATTATAAAAAAGTCTTATGTAAATAATTAAATAGTTTATTGTTTTTCATCTCTGAAAAAAAAAATTATATATATATAA
ATATCTTTTTGTGAAAAATGTTAGATGGTCTTTTCGTTGGGGATCAATTTCATTTCTATATTTTGTCGTTTGTTTTGTTTGATCAA
ATCAAAGTATGGCGAGTGGTCCAACATGATGTTATTCTTTATGAACATCTTGTATATATAGAAGACGCGTTATTCACCGTTTTGCA
C
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_178651 kinase-like protein [Arabidopsis thaliana] | 2044 | 5e-227 |
| XP_002885808 hypothetical protein ARALYDRAFT_899389 [Arabidopsis lyrata subsp. lyrata] | 2004 | 2e-222 |
| BAB09992 serine/threonine protein kinase-like [Arabidopsis thaliana] | 1630 | 5e-179 |
| XP_002326125 predicted protein [Populus trichocarpa] | 1564 | 2e-171 |
| XP_002868426 hypothetical protein ARALYDRAFT_355547 [Arabidopsis lyrata subsp. lyrata] | 1559 | 9e-171 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P43293 Probable serine/threonine-protein kinase NAK | 927 | 7e-099 |
| O49840 Protein kinase 2B, chloroplastic | 914 | 2e-097 |
| P46573 Protein kinase APK1B, chloroplastic | 912 | 4e-097 |
| Q06548 Protein kinase APK1A, chloroplastic | 904 | 3e-096 |
| O49839 Protein kinase 2A, chloroplastic | 901 | 7e-096 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZUF4 Putative uncharacterized protein At2g05940 | 2044 | 3e-227 |
| Q9FH10 Serine/threonine protein kinase-like | 1630 | 4e-179 |
| B9MSZ4 Predicted protein | 1564 | 2e-171 |
| B9RRA2 Protein kinase APK1B, chloroplast, putative | 1549 | 9e-170 |
| C6ZRQ0 Kinase-like protein | 1531 | 1e-167 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G05940.1 protein kinase, putative | 2051 | 3e-230 |
| AT5G35580.1 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 1510 | 2e-167 |
| AT2G26290.1 ARSK1 (root-specific kinase 1); kinase | 1176 | 8e-129 |
| AT1G61590.1 protein kinase, putative | 1148 | 1e-125 |
| AT5G01020.1 protein kinase family protein | 1145 | 3e-125 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
