 |
Information for unigene UN08195
| FASTA Sequence |
| Unigene ID: UN08195 | Length: 825 |
SSR | | TAAAGTTTTGCTATTATTATTTTTGGATCTCAATCCTCAGAGAGTATATATTTCCATCAAGTTTGCAAACTGATACATTTGTCTAA
ACCAAACGGAACCGTTTAGAAAATCAAGAACTAGAAAAGACCTTGGCAAGACTGCTCTGAAGTAAAGCAACTGACTCAACAGCAGA
TTTAGCAAACCAGCTGACACCTACTTTAAACCGGTGTTCATCAGTCGGTAGTCTAATCAAATACGCCAGCTTCCTTGCTGCGTGAC
CAACTGGACCTTCAAGTGTAAGCCCTTCAATGAAACTCGGCGTTATAGCTGCATCATATCTTCCAAGAGTCATCATCTCACCTAAG
TTCTGAAACCTGAATGGTAACAAAGGACGGTTGTTAATGGCAGCCCATATATTCCAACCGGTAAAGTCTGCTTCTTGAAAAGCAAC
CTGAGCTGTTGTGGGAAGAAGCTTCCCGTTTGAGTCTCTCAAGGAAGAAGAGTCACCTAACGCGAATATCCGAGGATGTCCCTTGA
CACGGAGTGTCTCGTCTGTTTCAGCTTGTCCTCTAACGTTCAGAGGAAGGACACTAGGACCTGAAGGCTCTAGCTCGGTGAGCAAA
GGCTTAGCACCTACTGTCCACAACACCATATCAGCTTCGATGACTTGACTCTCTACTCCTTTCTCTGTAGGCTGAAGCTCTAACAC
ATACCCTCCTCCATCTTCTTCTTCTTCTTCTTCTGAATCGCTTGCTTTCTTTATGCAACGAACAAGATAACCCAAGAGTAACTGGA
CTTTTCTCGACGTAAGAACCTTCATAGCTGCCTCTCTGTTCCCATCAGGGG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873381 hypothetical protein ARALYDRAFT_908854 [Arabidopsis lyrata subsp. lyrata] | 1074 | 5e-115 |
| Q8GXR9 RecName: Full=Probable NADH dehydrogenase, chloroplastic/mitochondrial; Flags: Precursor | 1069 | 2e-114 |
| BAC42708 putative NADH dehydrogenase [Arabidopsis thaliana] | 1064 | 7e-114 |
| NP_568205 NAD(P)H dehydrogenase C1 [Arabidopsis thaliana] | 1055 | 8e-113 |
| CAC35879 NADH dehydrogenase-like protein [Arabidopsis thaliana] | 1026 | 2e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8GXR9 Probable NADH dehydrogenase, chloroplastic/mitochondrial | 1069 | 9e-116 |
| P44856 NADH dehydrogenase | 171 | 1e-011 |
| Q49W80 NADH dehydrogenase-like protein SSP1834 | 136 | 1e-007 |
| Q5HQM1 NADH dehydrogenase-like protein SERP0527 | 136 | 1e-007 |
| Q8CPV5 NADH dehydrogenase-like protein SE_0635 | 135 | 2e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HF65 Predicted protein | 935 | 5e-099 |
| B9SPU4 NADH dehydrogenase, putative | 805 | 5e-084 |
| B9FS66 Putative uncharacterized protein | 735 | 7e-076 |
| B8B3Z1 Putative uncharacterized protein | 731 | 2e-075 |
| Q69Y16 Os06g0214900 protein | 731 | 2e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G08740.1 NDC1 (NAD(P)H dehydrogenase C1); NADH dehydrogenase | 1056 | 3e-115 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
