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Information for unigene UN08203

FASTA Sequence
Unigene ID: UN08203Length: 1716  SNP
GCAAGGAAGAGAATTGGAAGTATCTCCAAGTCTGCCAAGATGATTGCTTGTATAAAAGAATTGTCCAACGTTAAAGAAGAAGTATA
CGGAGCGCTTGACTCCTTCATTGCCTGGGAGTTAGAGTTCCCTCTTGTCATAGTCAAGAAGGCTTTAGCTATTCTTGAAGATGAAA
GAGAGTGGAAGAAGATTATTCAGGTGACAAAATGGATGCTGAGCAAAGGTCAAGGAAGAACAATGGGAACTTACCTCTCATTACTA
AACGCTCTAGCTGAAGATAACCGGCTCGACGAAGCTGAGGAACTGTGGAACAAATTGTTCATGGAGCATTTAGAAGGAACTCCGAG
AAAGTTCTTCAACAAGATGATCTCTATCTATTACAAGAGACATGCACCACAAACTCTTTGAGGTGTTTGCTGACATGGAAGAACTT
GGAGTGAAACCTAACACTACGATTGTGGATATGGTTGGGAAAGTGTTTTTGAAACTTGGGATGAATGATAAGTACGAGAAGCTGAT
GAAGAAGTATCCTCCACCACAGTGGGAGTTCAGATATATCAAAGGAAGACGTGTTAAGGTCAAGGCGAAGCAGCTGAATGAGCTAA
GCGAAGGTGAAGGAGGTTTAAGCAGCGACGAAGACAAGATTGAGAGTAAATTTGATATGTTATCAGTTGAGGAAGCAAACCAAGAT
GGTGATGATTTCAGTGAAGAGGAAGAAGAAGGTTTGGGGGGGAATCAAAGACAGATTGGAACATCTAGAGAACCATGTCTTGATCA
TTTGGACTCTTCTTGACTTATAAGTGTTCACTTAATGAGCCTTTGAGATTTTGTATATACTATTGGATCATGCATGGAAACATTTT
GAGTCATGTTTCTGTCAGAAACTCAAGCTCAGTCCAAGAAAACTTAGGAAAAGTCAAAACAAGACACCAACTAATGTCAAAACGAT
AAAGAAACTCAGCAAAGAATCTTACTGAGTATCATCACTGTGTAAAGATTTGAAGCAAAAACTAATGTATTTCAGATCAAAGTTAA
ACTCCCTTTTGTTTATTCAATCTTCATCTGATCCTGACTCTTCAGAACTCGATTCCTTCTTGTTTACTTTCTTCTTTGATCCTCTC
TTCTTATCTTCCTCGTCCTCACTGTACTCACTTTCATAATCCTCCTCTTCAATCTCATCTTCTTCTTCCTCCTCATCCTCCATACC
CTCTCCTGCAGCCTCACCATCCACATCACGGGTTCTTTTCAAAACCTCCACTTTCAGTGACGTCTTTTGGTCACAACCAATCCAAG
CATCGCTTAGGCAGAGGCAAGTCAAGTTATAAGTACCTTCCCGAGGTGCCAAGACTCTCCCCATCACCAATCTTGATCCAATTTTA
ACCTTCTCAACAGCTTCTTCAACTGCATTGTTCTTTGCCTCAACGCTTGCTCCTGAACTCTCCATCGTCTCACTAATAGCAATCGA
AGCAGTGCTTATAGCTTCAGCTTCATCCATGAAACTAACCTTCTGAAAGAACCAGACATTGTTTGAATCCGCTAGAAGAACCCAAA
AGTTCTCCTCCTTGTGGAAAGGGAAGCAAGGCGAGTGAGGAACAGCGCCTACAAGTCCATTGGGACGTTTCAGAGTGATCCAAGCT
TGAACTGTCGTCACGTCACCTTCTTGAATACCTTCTTCGCCTTCTGTTTGCAAGTGACTTCTATTTCAGAGAAGTATCATTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869902 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata]9074e-095
NP_567621 DnaJ / Sec63 Brl domains-containing protein [Arabidopsis thaliana]8805e-092
AAK92727 unknown protein [Arabidopsis thaliana]8805e-092
CAA17537 putative protein [Arabidopsis thaliana]8805e-092
XP_002889318 heat shock protein binding protein [Arabidopsis lyrata subsp. lyrata]7632e-078

Swiss-Prot top hits (Blast detail)Scoree value
Q8LG95 Pentatricopeptide repeat-containing protein At4g211906302e-064
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic3183e-028
Q7ZUP0 Acidic leucine-rich nuclear phosphoprotein 32 family member A1346e-007
Q7M732 Retrotransposon-like protein 11292e-006

TrEMBL top hits (Blast detail)Scoree value
O49559 Putative uncharacterized protein AT4g211808803e-092
Q949Z5 Putative uncharacterized protein At4g21180 (Fragment)8803e-092
B9MX62 Predicted protein7362e-075
A9P7Y5 Predicted protein7334e-075
Q0WL47 Putative DnaJ protein7253e-074

Arabidopsis top hits (Blast detail)Scoree value
AT4G21180.1 ATERDJ2B; heat shock protein binding / unfolded protein binding8944e-096
AT1G79940.1 ATERDJ2A; heat shock protein binding / unfolded protein binding7564e-080
AT1G79940.2 ATERDJ2A; heat shock protein binding / unfolded protein binding7564e-080
AT1G79940.3 ATERDJ2A; heat shock protein binding / unfolded protein binding7564e-080
AT4G21190.1 emb1417 (embryo defective 1417)6302e-065

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  50%
 
93  30%
 
102  20%

Unigene MembersMember information