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Information for unigene UN08214

FASTA Sequence
Unigene ID: UN08214Length: 1421 SSR 
GGATAAAAGACAGTAATTGGTTTATCGAGAGTAGCCTTCCAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGATGTCTA
TGGGTATGGGGAATCTCATGCGGAAGTTGGGAAGTGGAAAAGGCAAAAGCAGTCCAAGTTTTACAGAGAGAACGACGTCGTCTATA
TCTGATGAACCATCCCCGTCGGATCTTTCTATCTCAGTTACCGACAAGATAAACGCTGCCAAGAAGAAGTACGCACTCATCCCTGA
CCGTTTCACGTCCCTGGACCAGGGAAAACTTCTTTCAATGGAAAATCTCTTCACGCTCTCGGAAGAACTCAGAGTCCATATGAGAA
GGCAATCTTTGTTATCGGCCAAACGTTAGCTCCTTTCGACGAAGACAATCTCATCCCCTGTTTCGGCTTTGGCGACTCAACGACAC
ATGACGAGGAAGTGTTCGGTTTCCACAGCGACAACTCCCCATGCCATGGCTTTGAAGAGGTCTTAGCATGTTACAAAAGAATCACA
CCTAACTTGATTTTATCAGGGCCAACGTCTTACGGACCGCTCATTGATGCTGCTGTCGACATTGTTGAAAAGAGCAACGGACAGTT
TCATGTTCTGGTGATTGTCGCTGATGGGCAGGTAACAAGAGGTTTTGATAAGGCCGAGGGAGAACTCAGTAAACAAGAGAGAACAA
CTATCGAAGCCGTTGTTAACGCCAGCTCATATGCTTTGTCGATTGTTTTAATCGGTGTTGGAGACGGTCCATGGGAAGACATGAGG
AAGTTCGATGATAAGATCCCTAAGCGTGCGTTCGACAACTTTCAGTTTGTGAATTTCACAGAGATCATTAAGAGAGATTCATCAGA
GTCAGCCAAAGAAACTGCCTTTGCTCTTGCTGCTCTCATGGAGATTCCCTTTCAGTATCGAGCAGCAACTGAACTCAGCTTACTCG
GGAAAACAACGGGATTAGCTAAGAAAATAAACCCGAGGCCACCACCCATTCCTTACACGCCTACTATTCGTACTGAACAACCATCA
CCTGCATCAGACGAACATACTCAGAATTGCCCAATTTGTCTGACTAGCCGGAGAGACGTGGCTTTTGGCTGTGGTCACATGACGTG
TAGAGATTGCGGATCCAGGATATCAAACTGTCCCATCTGCAGAGTACCGATCACAAGCCGGCTAAGGCTTTACACGTGATCTCGGT
GCCTTTGCACATAACAAAACACTTGCACATACTGTCTTTTTCCATTTCAGAATTTCCGGTTTGGTGTTTATCAAGTGTTTCTTACA
TTGTTCCAGAATCAGCTCGTACCATTCAGTTTCCTATGTACTTATAAATGTTAGTTAGCTTTGCAAGCAAGAATGATGAAGATTAG
CAATGTACAAAAACATGGGTTTTTTACATTTTTATTCGCTTTCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565206 Ca(2)-dependent phospholipid-binding family protein [Arabidopsis thaliana]13903e-151
XP_002887783 hypothetical protein ARALYDRAFT_477103 [Arabidopsis lyrata subsp. lyrata]13822e-150
XP_002316157 predicted protein [Populus trichocarpa]12121e-130
XP_002311280 predicted protein [Populus trichocarpa]11762e-126
XP_002443815 hypothetical protein SORBIDRAFT_07g002700 [Sorghum bicolor]10695e-114

Swiss-Prot top hits (Blast detail)Scoree value
Q9LY87 E3 ubiquitin-protein ligase RGLG27969e-084
Q9SS90 E3 ubiquitin-protein ligase RGLG17781e-081
Q09221 Copine domain-containing protein 22662e-022
Q54FY7 Copine-E2035e-015
Q96AX9 E3 ubiquitin-protein ligase MIB21443e-008

TrEMBL top hits (Blast detail)Scoree value
Q9SAL0 At1g79380/T8K14_2013902e-151
B9HYC3 Predicted protein12128e-131
B9HI27 Predicted protein (Fragment)11761e-126
C5YMZ0 Putative uncharacterized protein Sb07g00270010693e-114
B9H4B2 Predicted protein (Fragment)9861e-104

Arabidopsis top hits (Blast detail)Scoree value
AT1G79380.1 copine-related13918e-154
AT5G14420.1 RGLG2 (RING domain Ligase2); ubiquitin-protein ligase7968e-085
AT5G14420.3 RGLG2 (RING domain Ligase2); ubiquitin-protein ligase7968e-085
AT5G14420.4 RGLG2 (RING domain Ligase2); ubiquitin-protein ligase7968e-085
AT5G14420.2 RGLG2 (RING domain Ligase2); ubiquitin-protein ligase7968e-085

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  100%

Unigene MembersMember information