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Information for unigene UN08215
| FASTA Sequence |
| Unigene ID: UN08215 | Length: 1494 |
SSR | | AAAACGCGTATGAGAGAGAGAGAGAGCTATCGATGTGATCTCCAACATCGCTTCTTCTTCTTCAGATATCAATTTTTCATTGCGTG
TAAAATTGAGAAACTCCTTTTGAGTCGAGGTTTTTGGATACGACTCTTTTTTGATGATCTAACATCGGAATGTTGCTTAGTTAAAT
GGAAAAGAAGAGAACAGATGACAGTGAACCTGTCCCTGTCCCTGTCATTGCACCGGTTGATAGATTTGGGTTTCTCAAGCAGCAGG
AACACGGCAACAATTCTCCTCAACGTTTCATCAAGACTAATAGATCATCTACCAACTATGAAAAGTATTTGTCTCAATTGGGAGGA
GAGAAGGGTGACAAAATGGAGGAAGATGATTGGAGCCGGAGGCAGTGACTGGAAGCATTACGTCAGAAGAAAACCTCATGTGGTCA
AAAGGCGGATTCGAAAAGGGATCCCTGATTGCTTAAGGGGTCTTGTCTGGCAGTTGATCTCCGGAAGTCGAGACCTTTTGCTTATG
AATCCCGGTGTTTATGAGCAACTGGTGGTTTATGAGACGTCAGCTTCAGAGCTCGACATCATCCGGGACATATCCCGGACTTTCCC
GTCTCATGTTTTCTTCCAGAAGAGACATGGACCAGGCCAAAGATCACTGTACAATGTTCTGAAAGCGTACTCTGTCTATGACAGAG
ATGTCGGATACGTTCAGGGAATGGGGTTCGTAGCCGGTTTGTTGCTTCTTTATATGAGCGAAGAAGATGCCTTCTGGTTACTAGTT
GCATTACTCAAAGGAGCTGTTCACTCCCCAATGGAAGTATTGTATCAGGCAGGGCTTCCTCTGGTACAGAAATATCTGTTACAGTT
TGATCAGTTGGTAAGAGAGCTAATGCCAAAACTAGGAGAACACTTCACTCAAGAAATGATCAATCCGAGTATGTATGCAAGCCAGT
GGTTCATAACAGTCTTCTCCTACTCGTTTCCTTTCCACTCAGCTCTAAGAATCTGGGATGTGTTTCTAGCAGAGGGTATAATTATT
GTGTTCAAAGTGGGGTTAGCATTGTTGAAGCATTGCCATGATGATTTGGTGAAATTGCCATTTGAGGAACTGATGCATGCTTTAAG
GAACTTTCCTGAAGATGCCATGGATCCTGATACTTTACTTCCATTGGCTTACTCCATCAAGGTAGCAAAGCGTTTGGAAGAAATGA
AACAGGATGGTGAGAAGACCGTAGCTAAACCGGCCAAAACGACCAACCCGGTTCAGCAATGATCTTGAGCCCCATGGGTCTCTCTT
TTACTCAATTCTTCTTTTGCAACTCACGTGTGAAGAAAGCATAGTAGTTTTTTTAATTCTTTTGTATTTAAATTCCAAGAAAATCA
AACTTCCTAGTTTCTCCTTTCTATTTTTTTGGCATGATTTTTTGTTTGTTTGTTGTGTTTAACATGCTTCTGTAACGTCCAAGTCA
CGATGTATTGCATCTTTAGAAAGTTCAAATGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871692 hypothetical protein ARALYDRAFT_488442 [Arabidopsis lyrata subsp. lyrata] | 1520 | 2e-166 |
| NP_197097 plant adhesion molecule 1 [Arabidopsis thaliana] | 1518 | 4e-166 |
| AAM97143 plant adhesion molecule PAM1 [Arabidopsis thaliana] | 1461 | 2e-159 |
| ABD96952 hypothetical protein [Cleome spinosa] | 1434 | 2e-156 |
| XP_002525957 ecotropic viral integration site, putative [Ricinus communis] | 1422 | 6e-155 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96CN4 EVI5-like protein | 491 | 2e-048 |
| O60447 Ecotropic viral integration site 5 protein homolog | 486 | 8e-048 |
| Q9VYY9 TBC1 domain family member CG11727 | 478 | 7e-047 |
| Q9Y3P9 Rab GTPase-activating protein 1 | 451 | 9e-044 |
| Q5RAN1 Rab GTPase-activating protein 1 | 451 | 9e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O81347 Plant adhesion molecule 1 | 1518 | 3e-166 |
| Q8L756 At5g15930 | 1461 | 1e-159 |
| Q1KUN4 Putative uncharacterized protein | 1434 | 2e-156 |
| B9SIY8 Ecotropic viral integration site, putative | 1422 | 4e-155 |
| A9PF38 Putative uncharacterized protein | 1407 | 2e-153 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G15930.1 PAM1 (plant adhesion molecule 1); RAB GTPase activator | 1519 | 1e-168 |
| AT3G02460.1 plant adhesion molecule, putative | 1388 | 2e-153 |
| AT3G02460.2 plant adhesion molecule, putative | 1106 | 9e-121 |
| AT3G07890.1 RabGAP/TBC domain-containing protein | 327 | 2e-030 |
| AT3G07890.2 RabGAP/TBC domain-containing protein | 327 | 2e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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