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Information for unigene UN08224
| FASTA Sequence |
| Unigene ID: UN08224 | Length: 1261 |
| SNP | TTTTTTTAGTATCACAACCATATGTATTACATTACACGAGATTAAACGTTACAAGTTGTAACTTACAACCCAACCATTGTAAAAAA
AAAACACAACCATTGTAAATACTTTAGTAGCTGCGGGCTGTTACGACTTTTTCTCACAGCCACTTCAACTGCACTCATTCACTTTC
CCTCACAATTAAAACACCAACCCCCCAAAAAAACTAATTAAAAACACACACAAAAACAAAAGTCATAGATACCAATCCCCCCTTGA
TTTTCTCTCCTTAGTATAGAATTTTGCAAAAAAGAAGCGAAATTAGCGGAGAGTTTTCTTTTGTCTCGACCACTTAAAGATAGAGT
TTCTTGAAAATCGGTTAGACCCTGAAATTCTTGCCGACATAGGTTTGACCAAACTGCCAGTTAGAAGGAACTATGTTCCATGAAGT
CGAGGTTCTACGATCACTGCCTGTGACTCGGAAAGAAAGTGACTGACCAACCAAGACAGCGTTAGATTGCCAGTTCTGACCCCAGT
TTCTGCTCAAACTCATCCAACCAGTTCGCGAACCTTTCACGCTCGTCCTCACGATGTCTCCTGCTCCCGCCACGTTAGTGATCAGA
ACCAAGTTGAAGTAACGGTGACCGTTGATTGTGAACCTTATCCCTCCTCTCTTTCTACAAGGCACCCTGCGGTATGAAACTGGGAC
AATGCCGGCACGATATTGAGCGATCTTGAGGAAGACAGGCATGGCTAGATCAAAGTGGGCTCTTGGCGGGTTGCACCATCCTCCGT
TATCACTGGCCTGAGCAAAGTTTGGTGGGCAGAAATTGGTTGCGGTAATGAGTATCGATGGGCTACCTGAATGGCACCATTGTGGG
TCGTTGGCACATTTTAGCTCAAAGCAGGCTCCACAACTCATACCACTGTTAAACAGAGCCGTGCTCAAGGCAGCCGTGTTAGTTCC
GTAACCTTGGCTGTAAAGGTTACCGTAACCACAAGCTCCTCCCATAGTGCCGGAGGCGTCGCTGCCCCCATAGAAAGTGGCGTGTG
CGGTTTGCCACGCGCCGCCGGAGTAGACGCCGGGGATTTTTGCGTCGGCGAGGCTGAAAAGCACAAATGTGGTAAAGAGAATTGCT
ATTTTAGTAATGGCCATTTCTGTGTGAAGTGCTAAGAAGGGGTGTTCTAAAATTTCTATGAGGGTAGAGGAGAAGATAAAGAAAGA
GCTTGCGCTCTTGTTAAAGAAAGAGTTAGGTTTTGCTACTTGGAGAGATGATGGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACT67493 expansin A1 [Raphanus sativus] | 1399 | 2e-152 |
| NP_181500 expansin A4 [Arabidopsis thaliana] | 1336 | 4e-145 |
| XP_002881669 ATEXPA4 [Arabidopsis lyrata subsp. lyrata] | 1334 | 7e-145 |
| AAM62937 Alpha-expansin 4 precursor (At-EXP4) (AtEx4) (Ath-ExpAlpha-1.6) [Arabidopsis thaliana] | 1316 | 9e-143 |
| XP_002878036 ATEXPA16 [Arabidopsis lyrata subsp. lyrata] | 1239 | 7e-134 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D2I903 Expansin A1 | 1399 | 1e-152 |
| B9HTH5 Putative uncharacterized protein Ptr+E2EXPA15 | 1237 | 9e-134 |
| B9HMI8 Putative uncharacterized protein PtEXPA7 | 1226 | 2e-132 |
| A9PAY8 Putative uncharacterized protein | 1221 | 6e-132 |
| B9T4C8 Alpha-expansin 4, putative | 1220 | 8e-132 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G39700.1 ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) | 1337 | 1e-147 |
| AT3G55500.1 ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16) | 1225 | 1e-134 |
| AT2G28950.1 ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6) | 1185 | 5e-130 |
| AT2G37640.1 EXP3 | 1133 | 5e-124 |
| AT5G02260.1 ATEXPA9 (ARABIDOPSIS THALIANA EXPANSIN A9) | 1114 | 9e-122 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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