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Information for unigene UN08231

FASTA Sequence
Unigene ID: UN08231Length: 1455 SSRSNP
AACTGAAGCATCTAAGACTCATTGGAACTTGTCTGAAAAAACTGTTTACAAATGCGATCAATATATATATGTGCACAAATTGAAAA
GAACTACATAAAAGACAGCCATATACAACAACTGATCAAATATTTATTACAAAACCAATAAAGAGAGACAATAAACTGTCCCTAAG
ATCCTGAACATTATTTCAGATTCTAAAATTCAGATTCTAAATAACTAGATCTTGAGGAGAAGCCTTGAAGGTTAGCTAAGTGTGCC
TGATTGCATCACAGGGAAGGACCAATCGCTGCTGTTCTTGGTCGAATCTCTATGTTCATCATCAACGGTCAAATGTTTCCCATCCG
TGGTGCCAAAATCGAACTCCTTACTCGGCCCCCCGAGAGAGGAATGCTGCGCTGCCTCTTGAAGAGACGACGTAGACGCTTCAGGG
AACGTTGTTCTCAGCTTCTGATCAACGCATCTAATGAAATGATCCGCGTCAAGATCGAACGAAACCGGTTTATTTGGTCTCGCAAT
CTTCATGTGCTCTTTAGGAGCTGTAACGGTCTTAGAGCAACGCAGTTTCCCAGGGCTCAGTAGCTTTGGTGGATCAGAGACTTGAA
AGTGAGCGACTCCGTCAGGAAAGGGAGAAGTCGTACCAGAACCGGACATAACCGAGCTGGGCGAGATAAGCTGAGCGAGTGGACTA
CCGGGAGGAAGTTGGTAAAACTGAAACTCGTAGTTAGACACCGGAGACCTGACACCGTAGTTACTGCTGGAGTTAAAGAGCTGAGC
GAAAGGGACTTCAGGCGAAGAAGGTGTGGTGGTGGTTAAGTAGAAAGACTCGTCGAGAGGCGGCGTGACCGGAGCCGAAGACGGTT
CGGTTGTGTAAGTAGAGAAAACCGGAGGAGAAACCAGCTGAGGTTCGTGAGCGTAAGGTCCAATGGCGAAGATCGAAGGACGCTCT
TCGCTGTTGTTGTTGTTGTTGTGGTTGTTAGAAGGTAGAGGACTAAAGGAGAGGATCCCTACAGGCGATTGCGTAGCGGAAGGAGG
TTCTGATTGGAAGAAGGAAGCTGGAGAAGAAGGTGGGGCTATGAAAGGAAGAGCCGTCATAACCGAGCGATAACCGGAATTGGATG
TGGAATCGGTAGGAACCGGTTCGGGAGCGAGAGCAGCTTTCCCTATTCGTTTTTTTCTCTGTGTTGAAGGTCTGAAACATATGAAA
CGATTCCACCATCTTCGCTTCTTATGAATCGGGGAAGGTTGGTGATGAACACGATCATCAGAGGAAGCGAACGCAGTAGCGGCTGC
GTTTATAGTCTCCAAAACGTTGTTTCCACTCGCGCCGCCTCTCATCTTCCTCTGATCTTATATAACTTTCCGGAGAAAACAAAACA
GAGCATTCGAATTTCTCTCAAAGTATCAATACACAGAAAAAAAGGACTATGAAAATCAATGTCTCCTGTGAGTAAAGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAZ44327 hypothetical protein [Raphanus sativus]15803e-173
CAZ40337 hypothetical protein [Raphanus sativus]14862e-162
ABJ98061 unknown [Eutrema halophilum]13402e-145
XP_002886388 hypothetical protein ARALYDRAFT_474978 [Arabidopsis lyrata subsp. lyrata]13178e-143
NP_564816 uncharacterized protein [Arabidopsis thaliana]12415e-134

Swiss-Prot top hits (Blast detail)Scoree value
Q9SRE5 Uncharacterized protein At1g766602449e-020
Q54MV3 Rho GTPase-activating protein gacJ1292e-006

TrEMBL top hits (Blast detail)Scoree value
D0R6K0 Putative uncharacterized protein l7rfog315802e-173
C4WRH4 Putative uncharacterized protein14861e-162
A0FIZ9 Putative uncharacterized protein13401e-145
Q93W23 At1g63720/F24D7_912414e-134
Q9CAD7 Putative uncharacterized protein F24D7.910291e-109

Arabidopsis top hits (Blast detail)Scoree value
AT1G63720.1 EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 406 Blast hits to 313 proteins in 78 species: Archae - 0; Bacteria - 2; Metazoa - 123; Fungi - 81; Plants - 111; Viruses - 14; Other Eukaryotes - 75 (source: NCBI BLink).12465e-137
AT5G52430.1 hydroxyproline-rich glycoprotein family protein5191e-052
AT4G25620.1 hydroxyproline-rich glycoprotein family protein2861e-025
AT1G76660.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 280 Blast hits to 160 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 55; Fungi - 17; Plants - 64; Viruses - 4; Other Eukaryotes - 136 (source: NCBI BLink).2448e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  50%
 
121  13%
 
182  25%
 
211  13%

Unigene MembersMember information