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Information for unigene UN08255

FASTA Sequence
Unigene ID: UN08255Length: 694  SNP
GGGAAAGTCGCAGAGGAAGCTACTAAACTAAAGAGGAAGAGGAAGAGGAAGAGGAAGCAGAGCGAAAGGAAGAGAAACAATGGAGT
CACCGAAGAAGATAGCTCATGAGATCGGTGGCGTGAAGAGAGACGCTCTTCGATTTGGTCTCAACGGTGTTAAGAGCGACATCGTC
GGATCTCACCCACTCGAATCATCTTACGAATCTGGAAAGAGATCGGACGAGGCGATGAAGAGGACGATCATTGGGCATACCTACGG
GACTGCACTTCCACTGAAGATGGATATGGACACGCAAATTCTCTCTAGGTTTCAGAGACCTCCTGGACCAATTCCTTCGTCAATGC
TCGGTTTAGAAGTCTACACAGGAGCCGTTGATGACTTTGGTTTTGAGGATTACTTGAATGACCCTCGTGACTCGGAGACATTCAAG
CCCGTAGACTTCCACCACGGGATGGAAGTTCGTCTTGGCATGTCAAAGGGCCCTGTTGCCCCAAGTTTCATGTAAGGCCCCCCTAT
CATGGGTGGGGTTTTATTGCATGTTATGTCTTTTTAGATTTTGAATGATGAATCAAGTGGGATCGTTTTATAAACTTCTTTCTACT
TGTACTCTCTCTTGAGTCCTTGACCCAAGTTTGAAGTATGTTGAGACAACTACTGAATATGGTCAATCAATTCTAGTATGTTAGGT
TTTACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888582 proteasome maturation factor UMP1 family protein [Arabidopsis lyrata subsp. lyrata]6684e-068
NP_564892 proteasome maturation protein [Arabidopsis thaliana]6676e-068
AAG00256 F1N21.7 [Arabidopsis thaliana]6632e-067
NP_001190435 protein acclimation of photosynthesis to environment [Arabidopsis thaliana]6505e-066
XP_002868761 proteasome maturation factor UMP1 family protein [Arabidopsis lyrata subsp. lyrata]6443e-065

Swiss-Prot top hits (Blast detail)Scoree value
Q0DWQ7 Cyclin-B1-22524e-021
Q3SZV5 Proteasome maturation protein1663e-011
Q9Y244 Proteasome maturation protein1602e-010
Q5R9L9 Proteasome maturation protein1602e-010
Q9CQT5 Proteasome maturation protein1592e-010

TrEMBL top hits (Blast detail)Scoree value
Q94B05 At1g672506674e-068
Q9FYG8 F1N21.76631e-067
Q9FFV7 Gb|AAB95243.16316e-064
A5B647 Putative uncharacterized protein5662e-056
B9SIZ5 Proteasome maturation protein, putative5285e-052

Arabidopsis top hits (Blast detail)Scoree value
AT1G67250.1 proteasome maturation factor UMP1 family protein6682e-070
AT5G38650.1 proteasome maturation factor UMP1 family protein6323e-066
AT1G62920.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: proteasome maturation factor UMP1 family protein (TAIR:AT1G67250.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1377e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  57%
 
141  14%
 
92  29%

Unigene MembersMember information