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Information for unigene UN08259

FASTA Sequence
Unigene ID: UN08259Length: 709 SSR 
GAAAAGTTATGGCTAAACCAGTTGTGCACAGACCAGATCCAAGGATACATAATATGTGTCTAAACGAAGTTTTGAAATGGGAACAA
CTGTTGTTAAAGAAAACAAGGAATGGGAACGACTACGAATGTGTTCTTTTCCTTGTGCACACACCCCTAAATGTTACTCGAGGAAA
AAACAGAAACCTCCTCCTCCTAGTAGATTGCCACATCCAGATAATCTCCAATCTCAAAATGAAGGTCCGCGAGTGTTTTACTGTCG
TCTGGTTGTTTTCTGTTTGGATAAGACATCGTCTGACCAACCTGTCTGACAATAAAGCGGCCATTCTTGTCTGGATAAACAAACGC
AAACGATAATCTAGCATCTCTTCTCCTAGCTGCCACAGAAACCTCTTTGACCAAATCCGTTAGCTCGCGAAGATTGGCATCTTTCC
AAGTGTAAATCTGAACTTCGTCCTTTGGCTCTTTGCCTCTCACAGCATAATCTTCCTTAGTATGATGACCACCACTCTTGGTGAAC
ACACGAAGAAGCAAAGGACACGTCTTCTCGCGATCGACAGGTTCGGCTTTAGGGCGAGGGGGTTGATTAACGCCTCTCGGAGGAGG
CGGCGGAAACGGCCTCCCACCACCACCTTGTCTTCTCGCTGTTTCAGCCATCTCTCTTTCGCTCTCTCTCTCTCTCCCAAGTCTCT
CCAACGACGGTGATAGTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882023 hypothetical protein ARALYDRAFT_904009 [Arabidopsis lyrata subsp. lyrata]6911e-070
NP_566050 histone deacetylase complex subunit SAP18 [Arabidopsis thaliana]6731e-068
AAM67239 sin3 associated polypeptide p18 [Arabidopsis thaliana]6676e-068
NP_001189753 histone deacetylase complex subunit SAP18 [Arabidopsis thaliana]6362e-064
XP_002277566 PREDICTED: similar to Os02g0122000 [Vitis vinifera]5672e-056

Swiss-Prot top hits (Blast detail)Scoree value
O64644 Histone deacetylase complex subunit SAP186736e-070
Q3T022 Histone deacetylase complex subunit SAP183188e-029
O00422 Histone deacetylase complex subunit SAP183188e-029
Q5RDT5 Histone deacetylase complex subunit SAP183188e-029
O55128 Histone deacetylase complex subunit SAP183171e-028

TrEMBL top hits (Blast detail)Scoree value
Q6V9I5 P185601e-055
C6T2R6 Putative uncharacterized protein5473e-054
B9RDH5 Histone deacetylase complex subunit SAP18, putative5341e-052
B9GPT2 Histone deacetylase complex protein5277e-052
A2X0A2 Putative uncharacterized protein5196e-051

Arabidopsis top hits (Blast detail)Scoree value
AT2G45640.1 SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18); protein binding / transcription regulator6791e-071

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  23%
 
116  46%
 
92  15%
 
62  15%

Unigene MembersMember information