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Information for unigene UN08260

FASTA Sequence
Unigene ID: UN08260Length: 843  SNP
GGATACGAAGTTGTCACCCACTTCATCATTTCTCAATCGAGGATCGATCCGGAGACTCTTCTCTCACCCCCGGCCGTCATCATCTT
CCTTTTAATTCACAACCGTTTGTCGGCGCGACAAGAGATGCTTGCTTGACGACGACCGTTCTCGCCTCCATCTTTACCCTTTTCTT
TTGTGCTCAACAAGTAAAGAGAAGAATGTCGACACCAGCGAGGAAGAGGTTGATGAGGGATTTCAAGAGGTTGCAGCAAGACCCTC
CTGCTGGTATTAGCGGTGCTCCTCAAGACAACAATATCATGCTCTGGAATGCTGTTATTTTCGGGCCTGATGACACCCCATGGGAT
GGAGGTACTTTCAAACTCTCACTCCAGTTTTCTGAAGATTATCCAAACAAACCACCTACTGTTCGGTTTGTTTCACGGATGTTCCA
TCCAAACATTTATGCTGATGGGAGTATATGCTTAGACATCCTCCAAAACCAGTGGAGTCCTATATATGATGTCGCTGCTATACTTA
CCTCCATTCAGTCATTGCTCTGTGATCCTAATCCGAATTCTCCTGCCAATTCCGAAGCTGCACGAATGTTCAGCGAAAGCAAACGC
GAGTACAACAGAAGAGTCCGCGAGGTTGTGGAACAAAGCTGGACTGCTGACTAGTTATTATAATATGCTCTGGAACATCCTCTCTT
TTGTGTTTGGTTCTACTAGCTCTTTCCCTTTCTCTTTCCTGTCTTCCGTGTGTTTTTCAAACTCTGTGATTGTTGCTTTTAATGTT
CTTGTATTTCCATGTATTATCTCAACCACATTCATCTTCATAATTATCGGTATCTATTTCAGTTTGATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565289 ubiquitin-conjugating enzyme E2 A [Arabidopsis thaliana]8156e-085
CBI32005 unnamed protein product [Vitis vinifera]8102e-084
NP_563951 ubiquitin-conjugating enzyme E2 1 [Arabidopsis thaliana]8093e-084
ABC01903 ubiquitin carrier-like protein [Solanum tuberosum]8084e-084
P35130 RecName: Full=Ubiquitin-conjugating enzyme E2 2; AltName: Full=Ubiquitin carrier protein 2; AltName: Full=Ubiquitin-conjugating enzyme E2-17 kDa 2; AltName: Full=Ubiquitin-protein ligase 28075e-084

Swiss-Prot top hits (Blast detail)Scoree value
P42745 Ubiquitin-conjugating enzyme E2 28153e-086
P25865 Ubiquitin-conjugating enzyme E2 18091e-085
P35130 Ubiquitin-conjugating enzyme E2 28072e-085
P25866 Ubiquitin-conjugating enzyme E2 27893e-083
P42746 Ubiquitin-conjugating enzyme E2 37113e-074

TrEMBL top hits (Blast detail)Scoree value
A0T2P5 Ubiquitin carrier protein8154e-085
Q2PYX5 Ubiquitin carrier protein8083e-084
B7FGK6 Ubiquitin carrier protein8073e-084
A9PD36 Ubiquitin carrier protein8064e-084
A9NMK1 Ubiquitin carrier protein8056e-084

Arabidopsis top hits (Blast detail)Scoree value
AT2G02760.1 ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase8162e-087
AT1G14400.1 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase8109e-087
AT1G14400.2 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase8109e-087
AT5G62540.1 UBC3 (ubiquitin-conjugating enzyme 3); ubiquitin-protein ligase7113e-075
AT4G27960.1 UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase3592e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  15%
 
96  46%
 
122  15%
 
83  23%

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