 |
Information for unigene UN08285
| FASTA Sequence |
| Unigene ID: UN08285 | Length: 1397 |
SSR | | GGGAGTTTTCTTTCTATCAATCGGTTGTTTCCATGCTCAGGTTTCAATCGATCTTCAAGTTTCTATCTTTCTAAGTGATCGATTAG
GGTTTGGAAAGCTGTTTGGTTCTTGATTGCAGCTGTCTCACAGATTCTTGGTTTGATAATCGTTGTTGTAGATCGTTAGAGAGATT
TTAAATTAGGGTTGTCTTGATTCCTGTAATCATGGCGGATGCTGTGTCTTTGGTTGGTTCGATTGTGAGGATCTCTGTCAAGAACG
AAGCGAGAACAGTTCGATTCCCGGTGAAAGCGGTTGTGTTCGATACGAGAAACAAGAAGCCAATGTCAGTGTTCCCAATCAAGGCT
CTTGCTATGGAGCTGACGAAAGAGATGCCGAAGAAGAAGAAGAAGAAAGACCCAAGGACTTGGAACTATCTTGATTCCGGTTCGGT
TGATAAATGGCCTCCTCCTGAGAACAAAGCCGACAAGCCTTCCTTGCACAACCCTTTGCTAAGGCAAGAGCGTATGGGTTGCGGTT
GGTTAGGTGCGATATTCGAGTGGGAAGGTGTTTTGATCGAAGACAATCCTGGCCTTGAGGGGCAGTCGTGGCTTACTTTAGCTCAG
GAGGAAGGCAAGTCTCCTCCTCCGGCTTCTTTACTCAGACGCATCGAAGGGATGAAGAACGAGCAAGCTATCTCTGAGGTTCTGTG
TTGGTCGAGAGACCCTGGACAAGTTAGAGAATGGCTTCGCGTAAAGAGGAGATCTTTAAGCTTTAGATGGAGGAGTGTATAGACTG
AGAGACGGGTCACAGGAGTTTGTGAATGTTTTGATGAATAACAAGATCCCCATGGCTTTGGTTTCGACCCGTCCTCGTGAGACGCT
AGAGAACGCTGTTGGTTCGATTGGGATAAGGAAGTTCTTCAGTGTGATAGTTGCGTCTGAAGATGTTCACAGAGGTAAACCGGATC
CGGAGATGTTTGTTTACGCAGCGCAGCTTCTTGATTTCATACCGGAACGTTGCATTGTGTTTGGAAACTCGAACCAGACCATTGAG
GCTGCTCATGATGGGAAGATGAAGTGTGTTGCTGTGGCTAGTAAGCATCCGATGTATGAGCTTGGAGCGGCGGATCTGGTTGTGAG
AAGGTTGGATGAGTTATCCGTTATTGATTTGAAGAAGCTTGCGGCTGTTGAACTGACGGAGTTCGAACCGGAATTGGAGATGGAGA
AGGAAGATGAGCGTGAGCTGCCTTCATCTAATGTAGCAGTTGATGACTTCTTCTGATGGAAGTGATCTTCTGTAATGTTTGTACAG
TTTTATGGACTTGGATTCTTCCTCATGTAATTCGTATTCACAAAATGTTATAGTTTGTGTATAATTGGAACAGGTTACATGGAAAA
AATATATAAATGTACACTCGT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192894 haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] | 806 | 1e-083 |
| XP_002872601 hypothetical protein ARALYDRAFT_489979 [Arabidopsis lyrata subsp. lyrata] | 802 | 4e-083 |
| XP_002298034 predicted protein [Populus trichocarpa] | 655 | 4e-066 |
| XP_002509799 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] | 652 | 1e-065 |
| CAN82996 hypothetical protein VITISV_022195 [Vitis vinifera] | 644 | 8e-065 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9X0Y1 Phosphorylated carbohydrates phosphatase TM_1254 | 143 | 4e-008 |
| Q8ENK3 Pyrophosphatase ppaX | 136 | 3e-007 |
| Q928B2 Pyrophosphatase ppaX | 134 | 5e-007 |
| C1KYP8 Pyrophosphatase ppaX | 134 | 5e-007 |
| Q71WU6 Pyrophosphatase ppaX | 134 | 5e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LDD5 AT4g11570/F25E4_190 | 806 | 9e-084 |
| B9GKH9 Predicted protein | 655 | 3e-066 |
| B9RCB5 2-deoxyglucose-6-phosphate phosphatase, putative | 652 | 7e-066 |
| A5B9N8 Putative uncharacterized protein | 644 | 6e-065 |
| B9GWI4 Predicted protein | 631 | 2e-063 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G11570.1 haloacid dehalogenase-like hydrolase family protein | 806 | 5e-086 |
| AT4G11570.2 haloacid dehalogenase-like hydrolase family protein | 806 | 5e-086 |
| AT3G10970.1 haloacid dehalogenase-like hydrolase family protein | 200 | 1e-015 |
| AT3G10970.3 haloacid dehalogenase-like hydrolase family protein | 200 | 1e-015 |
| AT3G10970.2 haloacid dehalogenase-like hydrolase family protein | 198 | 2e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
