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Information for unigene UN08288

FASTA Sequence
Unigene ID: UN08288Length: 644  SNP
TTTTTTCGGAGGCTTTGATCACCGAACCCTAGTTTCTCTCGATCATCGATTCGCTTCTTCTTCTTTAGATACTGATCGAATCGACA
TGGCCAAAAACTCCTTCAAGCTTTCTAATCCTCTTGAGGTGAGAATGGCTGAATCTACTCGTATCAGAGAGAAGTACCAAGACAGA
GTTCCTGTGATTGTGGAGAAAGCTGCACAAAGTGATGTTCCTGACATTGACAAGAAGAAGTACCTTGTGCCAGCTGATCTAACCGC
TGGACAATTTGTGTACGTTGTGCGCAAAAGAATTAAGCTCGGAGCCGAGAAAGCAATCTTTGTCTTTGTCAAGAACACGTTACCCC
CAACTGCTGCATTGATGTCTGCAATCTATGAAGAACACAAAGACGAAGATGGGTTTCTCTACATGACATACAGTGGTGAGAACACG
TTTGGATCTTCCTGCTAATATGCTCTGATTTGATAGTTTGATCTTCTTGGTGATGAAGATTGTACATTCGTTTTCCCCCTCTAGCT
TCTTTTCTTCTGATTGGTCGACCTTAATAATGTCTTTTACTTTGTGGTTTTATCTTCTGAGAACTCCCTTTCTCAATGGATTTGAA
AAATATATCTTCAGTTAATTTGAGACTCTGTTTACATTTCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874805 hypothetical protein ARALYDRAFT_911720 [Arabidopsis lyrata subsp. lyrata]5806e-058
NP_001078424 autophagy-related protein 8a [Arabidopsis thaliana]5781e-057
XP_002869850 predicted protein [Arabidopsis lyrata subsp. lyrata]5734e-057
NP_567642 autophagy-related protein 8a [Arabidopsis thaliana]5635e-056
NP_192371 autophagy-related protein 8b [Arabidopsis thaliana]5635e-056

Swiss-Prot top hits (Blast detail)Scoree value
Q8LEM4 Autophagy-related protein 8a5633e-057
Q9XEB5 Autophagy-related protein 8b5633e-057
A2YS06 Autophagy-related protein 8C5203e-052
Q6Z1D5 Autophagy-related protein 8C5203e-052
Q2XPP5 Autophagy-related protein 8A5141e-051

TrEMBL top hits (Blast detail)Scoree value
A8MS84 Uncharacterized protein At4g21980.25787e-058
B9RXK4 Gaba(A) receptor-associated protein, putative5276e-052
Q6W5F3 Microtubule-associated protein 1 light chain 35232e-051
B7E7M3 Putative uncharacterized protein5204e-051
B9SV86 Gaba(A) receptor-associated protein, putative5204e-051

Arabidopsis top hits (Blast detail)Scoree value
AT4G21980.2 APG8A (AUTOPHAGY 8A); APG8 activating enzyme/ APG8-specific protease/ Atg8 ligase5785e-060
AT4G04620.1 ATG8B (autophagy 8b); microtubule binding5633e-058
AT4G21980.1 APG8A (AUTOPHAGY 8A); APG8 activating enzyme/ APG8-specific protease/ Atg8 ligase5633e-058
AT4G04620.2 ATG8B (autophagy 8b); microtubule binding5633e-058
AT1G62040.1 ATG8C (autophagy 8c); microtubule binding5061e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
106  50%
 
74  33%
 
112  17%

Unigene MembersMember information