 |
Information for unigene UN08289
| FASTA Sequence |
| Unigene ID: UN08289 | Length: 1058 |
| SNP | GGGAACAAAGAAGGATTGAAGAAGTTGCTAAGCTTCTCTGTTGGGAGAAGAAGTATGAACACGGCGAGATCGCTATCTGGCAGAAG
AGGGTCAATGATGAGGCATGCCGTTCAAGACAAGATGACCCTAGAGCCGACTTCCGCAAAACTGGTGATACTGATGATGTCTGGTA
CAAGAAAATGGAAGCATGTATTACACCTTATCCGGAGACTAGTAGCTCAGTGGCTGGAGGAGAACTTCAGGTGTTTCCAGATAGAC
TCAATGCAGTGCCGCCTAGGATCTCTAGTGGTTCCATCTCTGGTGTCACGGTTGATGCTTATGAAGATGATAACAGACAGTGGAGA
AAACATGTGAAAGCTTACAAGAGAATCAACAGTTTACTTGATACTGGAAGGTACCGTAACATCATGGACATGAACGCAGGGTTTGG
TGGGTTTGCTGCTGCTCTTGAATCTACAAAGCTTTGGGTTATGAATGTTGTCCCAACGATTGCTGAAAAGAATAGACTTGGAGTTG
TGTATGAACGAGGACTCATTGGAATTTACCATGACTGGTGTGAGGCTTTCTCTACATATCCAAGAACATATGACTTAATCCATGCG
AATCATCTCTTCAGTCTGTACAAGAACAAGTGCAATGCGGATGACATTCTTCTGGAGATGGATAGGATTCTCCGACCAGAAGGAGC
GGTTATAATCAGAGATGATGTTGACACATTGATAAAGGTGAAGAGAATCATCTCTGGGATGAGATGGGATTCGAAGCTGGTTGATC
ATGAGGATGGTCCTTTAGTTAATGAGAAGGTTTTGATTGCGGTGAAGCAGTATTGGGTCACCAACTCCACCTCGGCTCACTGAAGT
GTCAGTGTGACCTGGACATTTTGATCAAATGATAGGAAGCTTTATTCGTCCTTAGGGAATGTGAGAGAGCTAGACTCTCGTATTTG
TTACACTTCTTCAAGTATCCCTATTTATTTAATGTAATAGTTTACCAGGTAATTAACCCGCTCCTCTTTTTTTGGTTTTTGACATG
AAAGAAAAAAATCTGGGTTTTTTTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564265 putative methyltransferase PMT2 [Arabidopsis thaliana] | 1433 | 2e-156 |
| BAH19504 AT1G26850 [Arabidopsis thaliana] | 1433 | 2e-156 |
| XP_002893375 dehydration-responsive family protein [Arabidopsis lyrata subsp. lyrata] | 1432 | 2e-156 |
| XP_002522425 ATP binding protein, putative [Ricinus communis] | 1197 | 4e-129 |
| XP_002311593 predicted protein [Populus trichocarpa] | 1182 | 2e-127 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| B9DFI7 Probable methyltransferase PMT2 | 1443 | 6e-159 |
| Q94EJ6 Probable methyltransferase PMT14 | 961 | 4e-103 |
| Q9SZX8 Probable methyltransferase PMT17 | 808 | 2e-085 |
| Q9ZPH9 Probable methyltransferase PMT15 | 792 | 2e-083 |
| Q9C884 Probable methyltransferase PMT18 | 779 | 5e-082 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S8V6 ATP binding protein, putative | 1197 | 3e-129 |
| B9HJT1 Predicted protein | 1182 | 2e-127 |
| Q9M609 Putative uncharacterized protein | 1172 | 2e-126 |
| B9HVA8 Predicted protein | 1144 | 4e-123 |
| B7FM75 Putative uncharacterized protein | 1140 | 1e-122 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G26850.1 dehydration-responsive family protein | 1444 | 4e-160 |
| AT1G26850.2 dehydration-responsive family protein | 1444 | 4e-160 |
| AT4G18030.1 dehydration-responsive family protein | 961 | 4e-104 |
| AT1G26850.3 dehydration-responsive family protein | 857 | 4e-092 |
| AT4G10440.1 dehydration-responsive family protein | 808 | 2e-086 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
