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Information for unigene UN08301
| FASTA Sequence |
| Unigene ID: UN08301 | Length: 1609 |
| SNP | GGCTCATCAAACGGACAGCTCATTCCCGAGATAGAAACTAAACGACCGAAACCCTAGAGGAGAGAGAAAACAAAGAGGGAAAGTAA
ATGGCGGAAGCGAATTCTAGCCGTGGAGGAGGCGGAAGGAGAGGCGGCGGACCGATGGATGACGACAAGCTAGTCTTCGAGACGAC
GGAAGGGATCGAGCCCATCACTAATTTCAACGACATGGGAATCAAGGAAGACGTGCTTCGCGGCGTCTACGAGTACGGTTTCGAGA
AACCATCCGCGATTCAGCAGAGAGCTGTTATGCCGATTCTCCAAGGGAGAGATGTCATCGCTCAAGCTCAGTCCGGTACGGGGAAA
ACCTCCATGATTGCTCTCTCCGTCTGCCAAATCGTTGACACTTCGTCTAGAGAAGTTCAGGCATTGATATTGTCCCCAACAAGAGA
GCTTGCTTCACAAACAGAGAAGACTATTCAAGCTATTGGATTACACGCCAATATTCAGGCACATGCCTGCATTGGTGGGAAGAGCG
TTGGAGAAGATATCAGGAAGCTGGAGAATGGTGTCCATGTTGTCTCTGGGACACCTGGTCGTGTCTGTGACATGATTAAGAGGAAA
AGCCTACGCACCAGAGCTATTAAACTTCTGATTCTTGATGAATCTGATGAGATGCTTAGCAGAGGGTTCAAGGACCAAATCTATGA
TGTTTACAGATATCTTCCACCTGATCTTCAGGTTTGTTTGGTTTCTGCAACTCTTCCCCACGAGATTTTGGAGATGACTTCCAAGT
TTATGACGGAACCGGTGAAGATACTTGTGAAGCGTGATGAGTTGACTCTTGAAGGCATTAAACAATTTTTCGTTGCTGTTGAGAAA
GAGGAGTGGAAATTTGATACACTGTGTGATCTTTATGACACACTTACTATCACTCAAGCTGTTATCTTCTGCAATACAAAACGAAA
GGTGGATTGGCTAAGTGAGAAAATGAGGACTAACAACTTCACAGTCTCATCAATGCACGGTGACATGCCTCAGAAGGAAAGAGACG
AGATCATGAATCAGTTTCGGTCAGGCGACAGTCGTGTTTTGATCACAACAGATGTATGGGCACGTGGTATTGATGTGCAGCAAGTT
TCTCTTGTCATCAATTATGATCTCCCCAACAACCGTGAGCTTTACATCCATCGTATTGGACGATCTGGTCGTTTTGGGCGTAAGGG
TGTTGCGATCAACTTTGTTAAAAGCGACGACATTAAGATCCTCCGGGACATTGAGCAGTACTACAGTACTCAGATTGATGAGATGC
CAATGAATGTAGCTGATCTTATCTAAATGACCGTGTCTGAATGAGAAGGTTTTGTTCAGAGCTTGTGGTCATGCTGTTGCACTATC
TTATGATGCTTCATACCTACCCCCTTTGATGTTAGGTTTAGGGTTTTATTTTATTTCCCTTGTATTTGATTTTGGTGTTTTACACT
CAAAATGGTTCACTAAGCTGTATAATTTTGCTTATATTTTCTTACTAGGTAAAAAGTAAAATCTCTGTTTTAGCTAACCTTAATTC
CTTGTGCAAGACACCGCTAAATCTCTGTTTGTATATAAATATTTTAAGTTATATTTTAATA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883201 hypothetical protein ARALYDRAFT_479492 [Arabidopsis lyrata subsp. lyrata] | 2022 | 2e-224 |
| NP_188610 DEAD-box ATP-dependent RNA helicase 2 [Arabidopsis thaliana] | 1996 | 2e-221 |
| AAK91384 AT3g19760/MMB12_21 [Arabidopsis thaliana] | 1989 | 1e-220 |
| CAA09195 RNA helicase [Arabidopsis thaliana] | 1946 | 1e-215 |
| XP_002275011 PREDICTED: hypothetical protein [Vitis vinifera] | 1829 | 4e-202 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94A52 DEAD-box ATP-dependent RNA helicase 2 | 1996 | 7e-223 |
| Q10I26 DEAD-box ATP-dependent RNA helicase 34 | 1803 | 2e-200 |
| Q5VNM3 DEAD-box ATP-dependent RNA helicase 2 | 1797 | 9e-200 |
| P41380 Eukaryotic initiation factor 4A-3 | 1787 | 1e-198 |
| Q7ZVA6 Eukaryotic initiation factor 4A-III | 1609 | 5e-178 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S4I6 Dead box ATP-dependent RNA helicase, putative | 1822 | 2e-201 |
| C5XWR4 Putative uncharacterized protein Sb04g038330 | 1817 | 7e-201 |
| Q2MJJ9 Putative RH2 protein | 1799 | 8e-199 |
| B8AKV8 Putative uncharacterized protein | 1798 | 1e-198 |
| B7EMG9 Putative uncharacterized protein | 1797 | 1e-198 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G19760.1 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative | 1997 | 5e-224 |
| AT1G51380.1 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative | 1581 | 8e-176 |
| AT3G13920.1 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor | 1275 | 3e-140 |
| AT3G13920.3 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor | 1275 | 3e-140 |
| AT1G54270.1 EIF4A-2; ATP-dependent helicase/ translation initiation factor | 1267 | 2e-139 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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