 |
Information for unigene UN08313
| FASTA Sequence |
| Unigene ID: UN08313 | Length: 861 |
| SNP | GGGACTTTGTTGGCATCCTCATTGGAATCTCAGAAAGCAGTCCTATAAACAAGCTCTGTATCATTTCTGCTTCGCCCTCTTCACTT
TGCCTTCCCCGCCTCCTCCGTCTCACTCCGATATCTCTCTCTCCCTCCTTTGTATTCATGGCTTCCATGGCTACTGCCTCTACTTC
CCTGCAGGCTCGTCCTCGCCAAATGGCAACTGCGGTTAGATGTTTTAGCCAGGGAAGCAGAAACAATCTTTCTTTTACGCTTCGCC
AGCTTCCTACCCGCTTGAGCGTTTCTTGCGCTGCAAAACCTGAGACAGTGGACAAAGTGTGTGAAGTCGTCAAAAAGCAACTCTCA
CTTAAAGCCGGCGACGAAGTTACGGCTGCCACCAAATTTGCTGCACTTGGTGCTGATTCTCTTGATACGGTGGAGATTGTGATGGG
CCTGGAGGAAGCGTTTGATATTGAAATGGCGGAGGATAAAGCACAGAATATTGCGACAGTCGAGGAAGCAGCTGAGCTCATTGAGG
AGATCTTGAAGGAAAAAGCTTAAGTCCAATATCATTTATTACAGAACCAACAATGGAAACACTAAGCCCAAAACCACTTATCTTGT
TATTGTTTGGTTAGGTAGAGACCACATCTGTCTGTTGAGATTTATGTTCGTTTGGGCAAAAATTATTACAAGGCTTGTATTTGACC
TTTTTTCATCTTTTTTTTTTTTTTGAAACTTGGCTTCTTTTTTTTCATCTTAAAACCTTTTACTTCCATTCTCCAGAAGTCACCTT
ACGATTTACGAATCGTTTTAATATATGTTGTTGAAAAGGAAAAGGTTTCATCTTAAAAGTTTTAATCGTGTGGAAATATTTAATAC
T
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564663 acyl carrier protein 3 [Arabidopsis thaliana] | 490 | 3e-047 |
| AAM63008 acyl-carrier protein ACP, putative [Arabidopsis thaliana] | 487 | 6e-047 |
| XP_002891904 hypothetical protein ARALYDRAFT_474734 [Arabidopsis lyrata subsp. lyrata] | 485 | 1e-046 |
| NP_175860 acyl carrier protein 2 [Arabidopsis thaliana] | 481 | 3e-046 |
| AAM65617 acyl-carrier protein (ACP), putative [Arabidopsis thaliana] | 481 | 3e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P25702 Acyl carrier protein 3, chloroplastic | 490 | 1e-048 |
| P25701 Acyl carrier protein 2, chloroplastic | 481 | 1e-047 |
| P17650 Acyl carrier protein, chloroplastic | 385 | 2e-036 |
| P32887 Acyl carrier protein, chloroplastic | 380 | 7e-036 |
| P07088 Acyl carrier protein SF2, chloroplastic | 367 | 2e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LDU8 Acyl carrier protein | 487 | 4e-047 |
| Q8LA22 Acyl carrier protein | 481 | 2e-046 |
| Q93XW3 Acyl carrier protein | 350 | 3e-031 |
| O04652 Acyl carrier protein | 346 | 1e-030 |
| A9PC53 Acyl carrier protein | 345 | 1e-030 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G54630.1 ACP3 (ACYL CARRIER PROTEIN 3); acyl carrier | 490 | 1e-049 |
| AT1G54580.1 ACP2 (ACYL CARRIER PROTEIN 2); acyl carrier | 481 | 1e-048 |
| AT5G27200.1 ACP5 (acyl carrier protein 5); acyl carrier | 346 | 6e-033 |
| AT3G05020.1 ACP1 (acyl carrier protein 1); acyl carrier | 342 | 2e-032 |
| AT1G54630.2 ACP3 (ACYL CARRIER PROTEIN 3); acyl carrier | 341 | 2e-032 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
