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Information for unigene UN08326

FASTA Sequence
Unigene ID: UN08326Length: 1321 SSR 
AGCTTCTTAAAAGTAATATAGATTCAATTTATTCGGAAGTTTATGACAGATTCTGATACAATAAGAGAAAACAAACAAGCCTTTCT
AGTCTTTCTTCAATTCTCAAAACAAGATACAAAATGTACCAAGAAACATAGTTGGAGATGTGAGCTTTAGGGACATGGTTTCTAAG
TATGAGAAATGTTCTTGCCAAAGAGACCAGCTATGCCTTTCTCAGGGTCGTTTTGCTTCACAATGGACTCACCAACCAATACCGCT
TTAACTCCAGCGGCTTGTACATAGGCAATATCATCAGGTGTAAACAGACCAGATTCACCAACCACAATCATGTCTTTCTCGCGGAT
TTGTCTACCATGCTCCCCTTCAAGAAGCTTCTTTGTATTACTAATGTCCACCTTAAATGTTTCAAGACTGCGGTTATTGATGCCAA
CAAGCTCGATCCCTTCTATTCCAAGAACACGACCCATCTCTCTCTCATCGTGCACCTCAACAAGGGCAGCCAAACCAAGCTTCTTG
GAGAGCTTAAGCAAGTAGGTTATTTCCAGGTCAGTAAGTATTGCAGCAATGAGCAGTACTGCGTCCGCACCTTTAGTCCGAGCATA
GTAGATCTGCCATGGATCTACAACAAACTCTTTGCATAATAGGGGACACTTCACACCAGCGCTTCTTATTGCTTCCAAGTTTTCAA
ATCCTCCCTTGAAATACTTCTGGTCAGTCAAAACACTGAGACACGCTGCACCGCCTCTTTCATAAGCTTGAGCAATTTCGACCGGG
TCAAAATTATCTTTCAGGATTCCTCTACTAGGAGAAGCCTTCTTAACCTCAGCGATCAAAGCAGGGAAGCCAGTCCTTTGATGAGC
CATCCTAAGCGCACCCACAAAATCCCTAGTGGGAGGAGCATTCTCTACAGCTTTCTTTAACGCCTCAAGTGGGTTCATTTCATTCA
TCCTGGAAACTTCTTGGTCTTTGTACCAAGTAATCTCCTCCAAGATGTTACTGGGAGAATCAGCATTATGCAATCTCAGCTCAAAC
GGTCCAGAATAACCCAGTGGAGCCTTGCTTGGTGGTTTTCTCCTGATCCTGATACCTTGGCTAATAGCTAATTCATTCTGATACAT
GTCTACTTCCCATTCCTTGATTCTTAGATCATTCTCTACTGATGAAGAAGAAGAAGAAGCAACACCTAAGCTCTGTTGAGCCCGGA
TCGTGAACTGCGACGGAGCTTTGGAACTGATCCTTGTGTCCATGGCAAAACCTGAAACCGAACGTCTGATCGAGACAGAACCGATA
CACCGATAGAGAGACGGTGAGACCAGTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM64536 putative indole-3-glycerol phosphate synthase [Arabidopsis thaliana]16951e-186
NP_178521 indole-3-glycerol phosphate synthase [Arabidopsis thaliana]16932e-186
XP_002883637 hypothetical protein ARALYDRAFT_480086 [Arabidopsis lyrata subsp. lyrata]16932e-186
AAA60380 indole-3-glycerol phosphate synthase [Arabidopsis thaliana]16035e-176
XP_002265275 PREDICTED: hypothetical protein [Vitis vinifera]13071e-141

Swiss-Prot top hits (Blast detail)Scoree value
P49572 Indole-3-glycerol phosphate synthase, chloroplastic16938e-188
B0JTM2 Indole-3-glycerol phosphate synthase7797e-082
B7K0H0 Indole-3-glycerol phosphate synthase7716e-081
Q55508 Indole-3-glycerol phosphate synthase7627e-080
B8HP79 Indole-3-glycerol phosphate synthase7341e-076

TrEMBL top hits (Blast detail)Scoree value
Q1EBW5 At2g0440016931e-186
B9T1U0 Tryptophan biosynthesis protein, trpc, putative12763e-138
Q8GYM9 Putative indole-3-glycerol phosphate synthase12361e-133
Q9LUB2 AT5g48220/MIF21_1112271e-132
B7FI09 Putative uncharacterized protein11949e-129

Arabidopsis top hits (Blast detail)Scoree value
AT2G04400.1 indole-3-glycerol phosphate synthase (IGPS)17161e-191
AT5G48220.1 indole-3-glycerol phosphate synthase, putative12277e-135
AT5G48220.2 indole-3-glycerol phosphate synthase, putative11821e-129

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  20%
 
92  40%
 
81  20%
 
101  20%

Unigene MembersMember information