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Information for unigene UN08356

FASTA Sequence
Unigene ID: UN08356Length: 901 SSRSNP
CTCTCTCTCTGTCTCCGATCTATCTATCACAAAGGAGAGAATAGAGGAAGTGCCAAAATGAGTAAGCTCCAGAGTGAAGCAGTGAG
AGAGGCGATATCGTCAATCATCACTCACTGCAAGGAGACGAAGCCTCGCAAGTTCACCGAGACAATCGAGCTCCAGATTGGTCTTA
AGAACTATGACCCTCAAAAGGACAAGAGGTTTAGCGGTTCCGTTAAGCTGCCTCACATTCCTAGGCCTAAGATGAAGATTTGCATG
CTCGGTGACGCCCAGCACGTTGAAGAGGCTGAGAAAATTGGGTTAGAGTCTATGGATGTGGAAGCTCTTAAGAAGCTGAACAAGAA
CAAGAAGCTTGTTAAGAAGCTAGCTAAGAAGTTCCATGCTTTCCTTGCTTCTGAATCGGTCATCAAGCAGATTCCCCGTCTTCTTG
GTCCTGGTCTCAACAAGGCAGGAAAGTTCCCAACTCTTGTCAGCCACCAAGAGTCTTTGGAATCCAAAGTGAATGAGACAAAGGCA
ACAGTGAAGTTCCAGCTCAAGAAGGTTCTTTGCATGGGTGTCGCTGTTGGAAATCTCGGCATGGAGGAGAAGCAGATCTTCCAGAA
TGTTCAGATGAGCGTCAACTTCCTTGTTTCCCTCTTGAAGAAAAACTGGCAAAATGTGAGGTGCTTGTACTTGAAGAGCACAATGA
GTCCACCCACCCGTGTTTTCTAAGATTTTTGTTTTATCTTTTAAGGTATCATAAGAAATTTGATTTTCTTTTGTCATGAGCCTTCT
TCTTCTTCTTGGATTACTTCCAGAACTCTGTAGGATGATCAAGATTTTGTTTAAAGACATTTTTATTTTTACTATTGTTATTGCTC
TTTGGTTGGTGTTCTCTATTTATCTACTCAATCTTATTATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197636 60S ribosomal protein L10a-3 [Arabidopsis thaliana]10792e-115
NP_563813 60S ribosomal protein L10a-1 [Arabidopsis thaliana]9941e-105
XP_002889688 60S ribosomal protein L10A [Arabidopsis lyrata subsp. lyrata]9931e-105
BAD09090 putative 60S ribosomal protein L10A (RPL10aC) [Oryza sativa Japonica Group]9805e-104
NP_565654 60S ribosomal protein L10a-2 [Arabidopsis thaliana]9752e-103

Swiss-Prot top hits (Blast detail)Scoree value
P59231 60S ribosomal protein L10a-310797e-117
Q8VZB9 60S ribosomal protein L10a-19945e-107
P59230 60S ribosomal protein L10a-29758e-105
Q9VTP4 60S ribosomal protein L10a-27562e-079
Q963B6 60S ribosomal protein L10a7534e-079

TrEMBL top hits (Blast detail)Scoree value
Q6ZJ04 Ribosomal protein9803e-104
A9NNS9 Ribosomal protein9705e-103
B7F845 Ribosomal protein9696e-103
B7FGL9 Ribosomal protein9696e-103
B8B9K6 Ribosomal protein9696e-103

Arabidopsis top hits (Blast detail)Scoree value
AT5G22440.1 60S ribosomal protein L10A (RPL10aC)10805e-118
AT5G22440.2 60S ribosomal protein L10A (RPL10aC)10805e-118
AT1G08360.1 60S ribosomal protein L10A (RPL10aA)10009e-109
AT2G27530.1 PGY1 (PIGGYBACK1); RNA binding / structural constituent of ribosome9811e-106
AT2G27530.2 PGY1 (PIGGYBACK1); RNA binding / structural constituent of ribosome9811e-106

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  13%
 
123  19%
 
67  44%
 
93  19%
 
101  6%

Unigene MembersMember information