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Information for unigene UN08363
| FASTA Sequence |
| Unigene ID: UN08363 | Length: 477 |
| SNP | GGGTAAAGAAGAAACACACAAACACACTTTGAAGCTTTAATAATTTCTGACAAGCATCAAAAAGAGCTAAAAAGAAGATGGGAACA
GCTACTTTCATAGATATTCTTCTTGCTATCCTCTTGCCTCCACTTGGAGTCTTTCTCAGATATGGTTGCGGGGTAGAGTTTTGGAT
ATGTTTGGTTTTGACGCTGCTTGGATACATCCCTGGGATCATATACGCCCTTTATGTGCTCACCAAATGATTTACCATCTATCATC
TCTTCTTGTATCTTCATCTCCTTGAACAGCTGTCTGGTCGTGTTCTACTCTTTGTGTGCGACTGATTCAACGTTTATTTCATCAAA
TGGTTTTTATGTTTCGAGCAATTTAATTCATCGTTGTTGTGTTTGCACTGTTATATAATTTTCTGTTGATATAAAGAAGACATCCT
TTGTTATATAGCCTGCTTATTTGATTGGTCATATACTTTGAAATCAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187239 Hydrophobic protein RCI2A [Arabidopsis thaliana] | 265 | 6e-022 |
| XP_002884538 predicted protein [Arabidopsis lyrata subsp. lyrata] | 263 | 1e-021 |
| ADK27677 plasma membrane protein 3-2 [Salvia miltiorrhiza] | 257 | 5e-021 |
| AEJ20974 cold-inducible protein [Caragana jubata] | 253 | 1e-020 |
| NP_565897 Low temperature and salt responsive protein [Arabidopsis thaliana] | 245 | 1e-019 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZNQ7 Hydrophobic protein RCI2A | 265 | 5e-023 |
| Q9ZNS6 Hydrophobic protein RCI2B | 240 | 4e-020 |
| A2Y075 Hydrophobic protein LTI6B | 231 | 4e-019 |
| Q0DKW8 Hydrophobic protein LTI6B | 231 | 4e-019 |
| Q9ARD5 Low temperature-induced protein lt101.2 | 228 | 1e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HU19 Stress-induced hydrophobic peptide | 245 | 8e-020 |
| Q941D7 At2g38901/At2g38901 | 245 | 8e-020 |
| B9HLY6 Stress-induced hydrophobic peptide | 244 | 1e-019 |
| D3XZW0 Putative uncharacterized protein | 244 | 1e-019 |
| Q2HRS6 Putative uncharacterized protein | 244 | 1e-019 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G05880.1 RCI2A (RARE-COLD-INDUCIBLE 2A) | 266 | 4e-024 |
| AT2G38905.1 hydrophobic protein, putative / low temperature and salt responsive protein, putative | 245 | 1e-021 |
| AT3G05890.1 RCI2B (RARE-COLD-INDUCIBLE 2B) | 241 | 3e-021 |
| AT1G57550.1 hydrophobic protein, putative / low temperature and salt responsive protein, putative | 203 | 8e-017 |
| AT4G30650.1 hydrophobic protein, putative / low temperature and salt responsive protein, putative | 179 | 5e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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