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Information for unigene UN08363

FASTA Sequence
Unigene ID: UN08363Length: 477  SNP
GGGTAAAGAAGAAACACACAAACACACTTTGAAGCTTTAATAATTTCTGACAAGCATCAAAAAGAGCTAAAAAGAAGATGGGAACA
GCTACTTTCATAGATATTCTTCTTGCTATCCTCTTGCCTCCACTTGGAGTCTTTCTCAGATATGGTTGCGGGGTAGAGTTTTGGAT
ATGTTTGGTTTTGACGCTGCTTGGATACATCCCTGGGATCATATACGCCCTTTATGTGCTCACCAAATGATTTACCATCTATCATC
TCTTCTTGTATCTTCATCTCCTTGAACAGCTGTCTGGTCGTGTTCTACTCTTTGTGTGCGACTGATTCAACGTTTATTTCATCAAA
TGGTTTTTATGTTTCGAGCAATTTAATTCATCGTTGTTGTGTTTGCACTGTTATATAATTTTCTGTTGATATAAAGAAGACATCCT
TTGTTATATAGCCTGCTTATTTGATTGGTCATATACTTTGAAATCAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187239 Hydrophobic protein RCI2A [Arabidopsis thaliana]2656e-022
XP_002884538 predicted protein [Arabidopsis lyrata subsp. lyrata]2631e-021
ADK27677 plasma membrane protein 3-2 [Salvia miltiorrhiza]2575e-021
AEJ20974 cold-inducible protein [Caragana jubata]2531e-020
NP_565897 Low temperature and salt responsive protein [Arabidopsis thaliana]2451e-019

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZNQ7 Hydrophobic protein RCI2A2655e-023
Q9ZNS6 Hydrophobic protein RCI2B2404e-020
A2Y075 Hydrophobic protein LTI6B2314e-019
Q0DKW8 Hydrophobic protein LTI6B2314e-019
Q9ARD5 Low temperature-induced protein lt101.22281e-018

TrEMBL top hits (Blast detail)Scoree value
B9HU19 Stress-induced hydrophobic peptide2458e-020
Q941D7 At2g38901/At2g389012458e-020
B9HLY6 Stress-induced hydrophobic peptide2441e-019
D3XZW0 Putative uncharacterized protein2441e-019
Q2HRS6 Putative uncharacterized protein2441e-019

Arabidopsis top hits (Blast detail)Scoree value
AT3G05880.1 RCI2A (RARE-COLD-INDUCIBLE 2A)2664e-024
AT2G38905.1 hydrophobic protein, putative / low temperature and salt responsive protein, putative2451e-021
AT3G05890.1 RCI2B (RARE-COLD-INDUCIBLE 2B)2413e-021
AT1G57550.1 hydrophobic protein, putative / low temperature and salt responsive protein, putative2038e-017
AT4G30650.1 hydrophobic protein, putative / low temperature and salt responsive protein, putative1795e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  25%
 
112  17%
 
92  17%
 
83  25%
 
202  17%

Unigene MembersMember information