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Information for unigene UN08364
| FASTA Sequence |
| Unigene ID: UN08364 | Length: 582 |
| SNP | GGCTAGAACATTCCGTCTCCCATCTTCTTTTGCCTAAGAGGAACAACCCTAGAGAATTCACACTCACCTCCGAGAGAAATGATGAA
GCGTCTGGTGCCAACGTTCAACCGCATCCTGGTGAAGAGAGTGATCCAGCCTGCCAAAACCGAAAGCGGCATCCTCCTTCCAGAGA
AAGCCTCCTCTCTGAACTCGGGAAAGGTGATAGCAGTGGGACCTGGTTCAAGGGATAAGGACGGGAATTTGATTCCGGTCTCTGTC
AAGGAAGGCGACACCGTTCTTCTTCCAGAGTACGGTGGTACTCAGGTCAAACTCGGCGATAACGAGTACCATCTCTTCCGGGATGA
GGACGTCTTGGGAACCTTGCACGAGGATTGACAAAGGCTAAACTCAACTACGAGCGTTCCTTTCGTCTTGTGGGTGAAAAAAGAGT
CATTTTTCTTTTTATCTTTTTATATGAGGTTGGACTTTGTTGATTATCATTGAAATTTAGACATCAATCTTAAACGATGCATCTTC
TGATTCCAATCTTTTCTACTTATCCCGGTGATCTGGTTTGATAAAATAAAAGCTCATTTCAGTGCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34090 unnamed protein product [Thellungiella halophila] | 478 | 3e-046 |
| NP_563961 chaperonin 10 [Arabidopsis thaliana] | 477 | 4e-046 |
| Q96539 RecName: Full=10 kDa chaperonin; AltName: Full=Chaperonin 10; Short=CPN10; AltName: Full=Protein groES | 467 | 6e-045 |
| XP_002875073 hypothetical protein ARALYDRAFT_322491 [Arabidopsis lyrata subsp. lyrata] | 430 | 1e-040 |
| XP_002264840 PREDICTED: hypothetical protein [Vitis vinifera] | 406 | 7e-038 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P34893 10 kDa chaperonin | 477 | 2e-047 |
| Q96539 10 kDa chaperonin | 467 | 3e-046 |
| P61603 10 kDa heat shock protein, mitochondrial | 238 | 1e-019 |
| P61604 10 kDa heat shock protein, mitochondrial | 238 | 1e-019 |
| Q64433 10 kDa heat shock protein, mitochondrial | 237 | 1e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GG69 Predicted protein | 405 | 6e-038 |
| C6T4J1 Putative uncharacterized protein | 400 | 2e-037 |
| C6SWC8 Putative uncharacterized protein | 398 | 4e-037 |
| A3FPF3 Small molecular heat shock protein 10 | 395 | 9e-037 |
| C6SZ55 Putative uncharacterized protein | 392 | 2e-036 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G14980.1 CPN10 (CHAPERONIN 10); chaperone binding | 478 | 2e-048 |
| AT1G23100.1 10 kDa chaperonin, putative | 383 | 2e-037 |
| AT5G20720.1 CPN20 (CHAPERONIN 20); calmodulin binding | 148 | 3e-010 |
| AT5G20720.2 CPN20 (CHAPERONIN 20); calmodulin binding | 148 | 3e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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