Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN08376

FASTA Sequence
Unigene ID: UN08376Length: 894 SSR 
GGCATCTCCCTTGGTTGGCTTTGCCAAGTCAGCATTCAAACATCTCAAAGCTAAACAACGCATTTACAAATTTTCCCAAACCAATT
TCCTTCAGCCAAAGGAAAAATAAATAAATAAAATTAACAAAAAACGTTCAGTCTATCTCTCTCTCTCTCTCTTTTGATACGTTGTG
AGATCGATCTAGATAACGATAGTTCGCCATGAATCCTGAGTATGACTATCTGTTCAAGCTTTTGCTTATCGGTGACTCTGGTGTTG
GAAAATCATGTTTGCTTCTAAGATTTGCTGATGATTCTTACCTGGATAGCTACATCAGTACCATTGGTGTTGACTTTAAAATCCGT
ACAGTCGAACAGGACGGAAAGACAATCAAACTCCAGATCTGGGACACAGCTGGTCAAGAACGTTTCAGGACTATCACCAGCAGCTA
CTACAGAGGAGCTCATGGCATCATTGTCACCTATGATGTCACTGACCAAGAGAGCTTCAACAACGTCAAGCAATGGCTTAATGAAA
TCGACCGTTACGCTAGTGAGAATGTGAACAAGCTACTCGTTGGGAACAAAAACGATCTCACTTCACAGAAGGTTGTATCCACTGAG
ACAGCTCAGGCTTTTGCAGATGAACTTGGGATCCCTTTCTTGGAAACAAGTGCTAAAAATGCAACCAATGTTGAAGAAGCTTTCAT
GGCCATGACTGCTGCTATTAAGACCAGAATGGCTAGCCAACCATCTGGAGGTGCCAAACCACCGACGTCCAGATTCGCGGACAGCC
GGTGAACCAGCAATCAGCTGTTGCTCATCTTGATTCATTAGTCTCAAAGGTCCTTTTGGATCATTACACATTATATCATTTGTTTC
ATGCATGTGACTTTTCAGTGTGACACTCAGTGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABD64935 GTP-binding protein, putative [Brassica oleracea]9464e-100
NP_568678 RAB GTPase-1A [Arabidopsis thaliana]9322e-098
NP_193486 RAB GTPase homolog 1C [Arabidopsis thaliana]9204e-097
AAL31108 AT4g17530/dl4800c [Arabidopsis thaliana]9204e-097
ABD65068 GTP-binding protein, putative [Brassica oleracea]9196e-097

Swiss-Prot top hits (Blast detail)Scoree value
Q05737 GTP-binding protein YPTM28557e-091
P28188 Ras-related protein RABD2A8323e-088
P40392 Ras-related protein RIC18172e-086
Q39571 GTP-binding protein YPTC18153e-086
P31584 GTP-binding protein yptV18054e-085

TrEMBL top hits (Blast detail)Scoree value
Q2A9V7 GTP-binding protein, putative9463e-100
Q9FPJ4 AT5g472009321e-098
Q8W4S8 AT4g17530/dl4800c9203e-097
Q9SEH3 AT4g17530/dl4800c9203e-097
Q2A9H3 GTP-binding protein, putative9194e-097

Arabidopsis top hits (Blast detail)Scoree value
AT5G47200.1 ATRAB1A; GTP binding9327e-101
AT4G17530.1 ATRAB1C; GTP binding9202e-099
AT1G02130.1 ARA-5 (ARABIDOPSIS RAS 5); GTP binding8323e-089
AT3G11730.1 ATFP8; GTP binding / GTP-dependent protein binding / myosin XI tail binding7411e-078
AT3G46060.1 ATRAB8A; GTP binding5966e-062

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  75%
 
121  25%

Unigene MembersMember information