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Information for unigene UN08380

FASTA Sequence
Unigene ID: UN08380Length: 1810 SSR 
CATGTTATCGTCTCTGCACCAACTTCAACGCATAAACACGACAAAGGCTTCCCCTATCCTGTCGAACATTCGCAAATTCTAGAGAT
GGACGTTGCGGGTGGCTAAATCTCCTTCTCCAGCTTGACCTTTAATTAGATGCGTCTGAGAAGAAACAACATTACTTTAACACCAA
TCTTAGATCCTAACTTTTGTAGAAGCGAAGCCATTGGTATGGAATATGAACTAGATTGTGCTGGACAACATCATCATCATCATCAT
TTATCAGCTGTCTCTACAACCGCTACATTATTCATTCCTTTATCTTTGAAAATCCATATTCGTGACGGCTTTCACGAGATTCTTTA
ATACCATTTTCATACACACACAAAAAGAAAACTTACTTTAGTTAAAAATTTAAATTGTTCAGAAGATTAGTCAGAAATGCAGGCTT
TTGTAAGTGGGAAGAAAAGAGTTGTATTAAATCACAACATGTGTTTCTCCAAAGACAATCTTGATGTTAGTACAGAGTTCTTGTCT
GATAATTACCGGGACGACCCTTTGATCCCGGGCTTGTCTGATGACGTCGCGAAGATGTGTCTAGCGCTTGTTCCGCGTAGTAGCTT
TCCTTCCATGGGACGTGTCTGCAAGAAATGGAGGTATGTTGTGAAGAGCAAAGAGTTCATTACTGTGAGAAGACTTGCCGGTATGC
CTGAGGAGTGGCTCTATGTTTTAACAACGAAATCTGGAGGGAAAGATAGCCACTGGGAGGTGTTGGACTGTCAGGGACATAAACTA
TCATCTCTTCCACCTATGCCTGGTCCTGCCAAAACAGGGTTTAAGGTGGTTGTGGTTGATGGGAAGCTCCTTGTCGTTGCTGGTTG
CGCCTTGATCAACGCTTCTCTTGTTGCATCTTCTGATGTTTATCAGTTTGATACTTGCCTCAACAGCTGGAGTAGACTAGAAGACT
TGAAGGAAGCACGCTATGACTTCGCTTGCGCTGAGGTGAATGGGCTTGTTTACGTGGTGGGAGGTCACGGTGTTGACGGTGAGAGT
CTGTCGAGTGCAGAGGTGTATGATCCAGAGACTGGTGTCTGGACTTGCATAGAGTCTCTGAGGCGTCCGAGATGGGGATGTTTCGC
TAGCGGCTTCAACGGGAAGCTATACGTGATGGGTGGGAGATCTAACTTTACTATTGGTAACTCTAAACTTGTTGATGTGTATAACC
CTCAGTGCGGCTCCTGGTCTGGCAGCAAAAACGGTTTAACTATGGTGACAGCTCATGTTGAAGTAGGAAAGAAGCTGTTCTGTATT
GATTGGAAGAACCAGAGGAAGATGTCAGTCTTCAATGCAGAAGATGAAACTTGGGAAGTGGTGGCTCTTCCGCTTTCGGGAAGCTC
CAGGGCAGGGTTCCAGTTTGGTAAGCTGAGTGGGAAGCTTCTGCTTTTTTCGTCTCAGGGAGAAACTGGTCACAGCACTTTACTGT
ATGACCCTGATGCTGCACCAGGCAAACAGTGGAAAACATCCGAGATAAAACTGTCCGGTCCGTGCGTATGCAGCGTAACAATCACA
GCCTGATTAATGTGGTCTTTATTACATTTTCGCCATTTTCCAAATCAAAGAGAGCATTGTCTCTTCTATAAGTTGATACAGTACTG
ATTTCAAATACTCAGTTTGAATAAAGTGAAGAGTGTTTTCTTTGAAACTGCTTTAGCGTTCTTGTGGTGTTCCTCCACTGTTTGTT
CCTTGTAACATATGATTGTGTTGACTTATGTTTAATTTGTGATTGTAATTTCCTAAACGATGTTTGAGGTAATATTTGGAATTGCT
CAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAC18788 Contains similarity to beta scruin gb|Z47541 from Limulus polyphemus. ESTs gb|T04493 and gb|AA585955 come from this gene [Arabidopsis thaliana]17051e-187
NP_176915 F-box/kelch-repeat protein [Arabidopsis thaliana]16995e-187
XP_002887123 kelch repeat-containing F-box family protein [Arabidopsis lyrata subsp. lyrata]16952e-186
XP_002272745 PREDICTED: hypothetical protein [Vitis vinifera]13035e-141
XP_002327284 predicted protein [Populus trichocarpa]12542e-135

Swiss-Prot top hits (Blast detail)Scoree value
Q9CAG8 F-box/kelch-repeat protein At1g6748016992e-188
Q9FZJ3 Putative F-box/kelch-repeat protein At1g274206501e-066
Q9C6Z0 F-box/kelch-repeat protein At1g300902942e-025
Q920Q8 Influenza virus NS1A-binding protein homolog2144e-016
Q6DFU2 Influenza virus NS1A-binding protein homolog2144e-016

TrEMBL top hits (Blast detail)Scoree value
B9MWF5 Predicted protein12541e-135
B9HKY9 F-box family protein12433e-134
B9RMG2 Protein AFR, putative12362e-133
B9HT85 F-box family protein12065e-130
A5BA49 Putative uncharacterized protein11771e-126

Arabidopsis top hits (Blast detail)Scoree value
AT1G67480.1 kelch repeat-containing F-box family protein17054e-190
AT1G67480.2 kelch repeat-containing F-box family protein17054e-190
AT1G27420.1 kelch repeat-containing F-box family protein6444e-067
AT1G30090.1 kelch repeat-containing F-box family protein2942e-026
AT1G14330.1 kelch repeat-containing F-box family protein1921e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
2110  71%
 
102  14%
 
111  7%
 
201  7%

Unigene MembersMember information