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Information for unigene UN08442
| FASTA Sequence |
| Unigene ID: UN08442 | Length: 1478 |
| SNP | GCCACCAACTCCTTCTTATCTCCAGCCACTACATCTGCTTCGATCATCACTCAATTTGCAGTGTTTTTCTATCTACTATGGCGACG
AAGAGAAGTGTAGGAACATTGAAGGAAGCGGATCTTAAGGGAAAGAGCGTGTTCGTGAGGGTTGATCTCAATGTTCCTTTGGATGA
TAACTCTAACATCACTGATGACACCAGGATTCGTGCCGCTGTTCCCACCATCAAGTACTTGATGGGTAACGGATCTAGGGTTGTTC
TCTGCAGTCACTTGGGTCGCCCTAAAGGTGTTACCCCTAAATTCAGCTTGAAGCCTCTTGTGCCGAGGTTGTCTGAGCTTCTCGGT
GTCGAGGTTGTGATGGCAAACGACTCTATTGGTGAGGAAGTCCAGAAACTAGTTGCAGGACTACCTGAAGGTGGTGTTCTTCTCTT
GGAGAATGTGAGGTTCTACAAGGAAGAAGAGATGAACGACCCTGATTTTGCAAAGAAGCTTGCTGCTCTTGCTGATGTCTATGTCA
ACGATGCTTTCGGAACTGCTCACAGAGCTCATGCTTCCACCGAGGGAGTTGCCAAATACTTGAAGCCTTCGGTCGCTGGTTTCCTC
ATGCAGAAGGAACTTGATTACCTTGTCGGAGCTGTAGCAAACCCCAAGAAGCCTTTGGCTGCCATCGTTGGAGGTTCAAAGGTCTC
CACGAAGATTGGTGTCATCGAGTCACTCTTGAACACCGTTGACATCCTCCTGCTCGGTGGTGGTATGATTTATACTTTCTACAAGG
CGCAAGGTCACGCGGTTGGATCTTCTCTTTTGGAAGAGGACGAGCTTGACTTGGCCAGGTCGCTCATGGAGAAGGCTAAAGCCAAA
GGTGTCTCTCTTTTGCTCCCAACCGATGTGGTTATTGCTGACAAGTTCGCTCCTGATGCTATAGCAAGATAGTGGCAGCCACGGCA
ATCCCAGATGGCTGGATGGGACTAGATATTGGTCCAGACTCAATTAAGACATTCAGCGAAGCTCTGGACACAACCAAGACCATCAT
CTGGAATGGTCCCATGGGTGTTTTTGAATTTGAAAAGTTTGCAGCTGGAACTGAGGCCGTAGCAAAGCAGCTTGCGGAGCTGAGTG
GAAAGGGAGTGACCACAATCATAGGAGGAGGTGACTCGGTGGCTGCCGTTGAGAAGGTTGGTTTGGCTGACAAGATGAGTCACATC
TCTACGGGAGGAGGTGCAAGTTTGGAGCTTCTAGAAGGAAAGCCACTTCCAGGAGTCCTCGCCCTAGACGACGCTTGAGAATCTTT
CAAGTTTCATCTATCTTCTTGTGTTTATTATACATGTAACCAGTCAATCTGGTTTCTGACTGCGGCTCTTTTATCGAGTGTTTCTT
TAGTTTGGAGCCTTTTTTAATAATGAAGAGAAACTTTGATTAGTAACTGATCCGGATTTCAATCAAGCATCAGTTGCTATAGCTCG
TCGATCGTTATTGTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM61185 phosphoglycerate kinase, putative [Arabidopsis thaliana] | 1347 | 3e-146 |
| NP_178073 phosphoglycerate kinase [Arabidopsis thaliana] | 1343 | 8e-146 |
| XP_002889253 hypothetical protein ARALYDRAFT_477124 [Arabidopsis lyrata subsp. lyrata] | 1342 | 1e-145 |
| ACJ11718 phosphoglycerate kinase [Gossypium hirsutum] | 1267 | 5e-137 |
| XP_002513352 phosphoglycerate kinase, putative [Ricinus communis] | 1242 | 4e-134 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q42962 Phosphoglycerate kinase, cytosolic | 1232 | 3e-134 |
| P12783 Phosphoglycerate kinase, cytosolic | 1172 | 2e-127 |
| Q42961 Phosphoglycerate kinase, chloroplastic | 1166 | 1e-126 |
| P50318 Phosphoglycerate kinase, chloroplastic | 1163 | 3e-126 |
| P29409 Phosphoglycerate kinase, chloroplastic (Fragment) | 1156 | 2e-125 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LFV7 Phosphoglycerate kinase | 1347 | 2e-146 |
| Q9SAJ4 Phosphoglycerate kinase | 1343 | 6e-146 |
| D2D2Z8 Phosphoglycerate kinase | 1267 | 4e-137 |
| B9RHY3 Phosphoglycerate kinase | 1242 | 3e-134 |
| O82158 Phosphoglycerate kinase | 1240 | 5e-134 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G79550.1 PGK (PHOSPHOGLYCERATE KINASE); phosphoglycerate kinase | 1343 | 3e-148 |
| AT1G79550.2 PGK (PHOSPHOGLYCERATE KINASE); phosphoglycerate kinase | 1343 | 3e-148 |
| AT1G56190.1 phosphoglycerate kinase, putative | 1162 | 3e-127 |
| AT1G56190.2 phosphoglycerate kinase, putative | 1160 | 5e-127 |
| AT3G12780.1 PGK1 (PHOSPHOGLYCERATE KINASE 1); phosphoglycerate kinase | 1159 | 6e-127 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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