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Information for unigene UN08443

FASTA Sequence
Unigene ID: UN08443Length: 892  SNP
GGAAGGAAGCAGTGTTCAGCCTTCAAATGAGCTTCCCAAGGCTCCAGTTGGCTGGGCTTGGTCTCTTAACCAGTTCAGATCATTCA
GATGGAACTTAACCGCCAGTGCCGCTAGACCTAACCCACAAGGGTCTTACCATTACGGAAAGATCAACATCACACGTACCATCAAG
CTAGCCAACACCAAGAACTTGGTGGACGGTAAGGTCAGGTTTGGGTTCAACGGTGTATCACACGTTGACACCGAGACTCCTTTGAA
GCTTGCTGAGTACTTCGAGATGTCCGAGAAGGTCTTCAAGTACAATGTCATCAAGGATGAGCCAGCAGCCAAGATCACTACACTAA
CCATCGAGCCTAATGTCCTTAACATCACTTTCCGTACCTTTGTCGAAATCGTCTTCGAGAACCACGAGAAGAGCATGCAATCCTTC
CATTTGGATGGTTACTCCTTCTTCTCAGTCGCTTCTGAGCCAGGAAGATGGACACCAGAGAAGAGAAGCAACTACAACTTGCTCGA
TGCGGTCAGCAGACACACCGTGCAAGTGTTCCCCAAGTCGTGGTCAGCCATCCTCTTGACATTCGACAACGCCGGTATGTGGAACA
TCAGATCAGAGAACTGGGAGAAAAGATACTTGGGACAGCAAATGTACGTCAGTGTTCTTTCCCCTGAGAAATCACTAAGAGACGAA
TACAACATCCCACTCAACACCAACCTCTGTGGTATCGTCAAGGGCTTGCCATTACCTACACCCTACACTATTTAATTAAACTCACT
TCCACAAAAGTTTTATTTATTTATTTGATATGTAAAGTTCTACTTTTTACAAGTGAGTGTATTACGTGACTGATTAACCCTTTCCT
AATCTCATTAAACATACTACTACTATAACTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882820 hypothetical protein ARALYDRAFT_478721 [Arabidopsis lyrata subsp. lyrata]13013e-141
NP_187948 protein SKU5-like 13 [Arabidopsis thaliana]12951e-140
XP_002894511 hypothetical protein ARALYDRAFT_474617 [Arabidopsis lyrata subsp. lyrata]12386e-134
NP_564697 SKU5 similar 14 [Arabidopsis thaliana]12296e-133
AAD10639 putative pollen specific protein [Arabidopsis thaliana]12296e-133

Swiss-Prot top hits (Blast detail)Scoree value
Q00624 L-ascorbate oxidase homolog10214e-110
P29162 L-ascorbate oxidase homolog9174e-098
Q9SU40 Monocopper oxidase-like protein SKU54982e-049
Q8VXX5 Monocopper oxidase-like protein SKS14945e-049
Q9FHN6 Monocopper oxidase-like protein SKS24882e-048

TrEMBL top hits (Blast detail)Scoree value
Q9LJF1 AT3g13400/MRP15_312951e-140
Q9SMW3 At1g5556012294e-133
Q9ZVV3 T5A14.2 protein12294e-133
B9GLA4 Putative uncharacterized protein10484e-112
B9SBL2 Multicopper oxidase, putative10233e-109

Arabidopsis top hits (Blast detail)Scoree value
AT3G13400.1 sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase12964e-143
AT1G55560.1 sks14 (SKU5 Similar 14); copper ion binding / oxidoreductase12293e-135
AT3G13390.1 sks11 (SKU5 Similar 11); copper ion binding / oxidoreductase10223e-111
AT1G55570.1 sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase10133e-110
AT1G41830.1 SKS6 (SKU5-SIMILAR 6); pectinesterase6532e-068

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
710  53%
 
181  5%
 
123  16%
 
104  21%
 
61  5%

Unigene MembersMember information