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Information for unigene UN08479

FASTA Sequence
Unigene ID: UN08479Length: 869 SSR 
GGCTCTCTCTCTCTCTCTCCATTACACAAATAATCCCCAAATCTTGAAAAGTTTTAGGGTTTGAAGTCTGAGAGAGATGAGTGCTT
CAAGGTTTATAAAGTGTGTCACGGTCGGCGACGGCGCTGTTGGAAAGGCTTGTCTGCTCATCTCCTACACTAGCAACACTTTCCCC
ACGGATTACGTGCCTACTGTGTTTGATAATTTCAGCGCCAATGTGATTGTGGATGGAAACACTATCAACTTGGGATTGTGGGATAC
TGCAGGACAAGAAGACTACAATAGACTAAGACCTTTGAGCTATCGCGGTGCAGATGTCTTCTTACTTGCCTTCTCTCTCGTCAGCA
AAGCTAGCTATGAAAATGTTTCTAAAAAGTGGGTACCTGAACTGAGACATTATGCTCCTGGTGTACCCATCATCCTCGTTGGAACC
AAGCTTGATCTTCGAGATGACAAGCAATTCTTGGTTGAGCACCCTGGTGCTGTGCCTATCTCTACTGCTCAGGGTGAAGAACTGAA
GAAGCTCATTGGGGCACCTGCTTATATTGAATGCAGTGCAAAAACACAACAGAATGTAAAAGCGGTGTTTGATGCGGCTATCAAGG
TAGTTCTCCAACCACCCAAGAACAAGAAGAGGAAGAAGAGAAAGTCTCAGAAAGGTTGTTCTATATTGTGATTCCACTAGAGAACC
AACCAACAGGAGGATTGAAGTAGCTCTCCACTTGTTTGTTTTCCTCAACAAAGGAGGAACCTGTTGTTTGTAGTCTTTTTAAAAAA
ACAAAACAGAAGAAGTAGTAACCAAGTATTTGTATTCTTGTTTGCATTTTGATCTGTATATATATTCCACGAATACTCTATTTCTT
TTGCTTCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195228 Rac-like GTP-binding protein ARAC3 [Arabidopsis thaliana]10073e-107
AAO42256 putative Rho1Ps homolog Rac protein [Arabidopsis thaliana]10047e-107
AAB97458 rac-like small GTP binding protein [Brassica rapa subsp. campestris]10031e-106
AAB38780 Rho1Ps homolog [Arabidopsis thaliana]10002e-106
XP_002278633 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]9724e-103

Swiss-Prot top hits (Blast detail)Scoree value
Q38912 Rac-like GTP-binding protein ARAC310071e-108
Q6EP31 Rac-like GTP-binding protein 59498e-102
O04369 Rac-like GTP-binding protein RAC19425e-101
Q39435 Rac-like GTP-binding protein RHO19363e-100
Q38902 Rac-like GTP-binding protein ARAC19292e-099

TrEMBL top hits (Blast detail)Scoree value
Q5PNX9 At4g3502010072e-107
O49180 Rac-like small GTP binding protein10037e-107
A5AP72 Putative uncharacterized protein9723e-103
B9SXU8 Rac gtpase, putative9696e-103
B9H198 Predicted protein9581e-101

Arabidopsis top hits (Blast detail)Scoree value
AT4G35020.1 ARAC3 (ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase10081e-109
AT2G17800.1 ARAC1; GTP binding9335e-101
AT2G17800.2 ARAC1; GTP binding9335e-101
AT1G75840.1 ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5); GTP binding / GTPase9263e-100
AT3G51300.1 ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding / GTPase activating protein binding / GTPase/ protein binding9263e-100

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  60%
 
72  40%

Unigene MembersMember information