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Information for unigene UN08482
| FASTA Sequence |
| Unigene ID: UN08482 | Length: 1473 |
SSR | | GGCAAGAATATTTGAACCAGCAAGGTTTCAATATTGTGGGCTATGGCTGCACTACGTGCATTGGTAACTCCGGAGAAATTAATGAA
TCAGTGGGAGCTGCTATCACAGAAAACGACATTGTGGCGGCTGCTGTGCTTTCTGGAAACAGAAACTTTGAGGGTCGTGTTCACCC
ATTAACAAGAGCCAACTACCTTGCATCGCCTCCTTTGGTTGTTGCCTACGCTCTTGCTGGAACGGTTAACATTGACTTTGAAACAG
AGCCTATTGGCAAAGGAAAGAACGGCAAAGGCGTCTTCCTAAGGGACATCTGGCCAACCACGGAAGAAATTGCTGAGGTTGTTCAA
TCCAGTGTTTTGCCTGACATGTTCCGAGCAACATACGAGTCGATCACCAAGGGTAACCCGATGTGGAATGAGCTGTCTGTTCCTGA
AAACACCCTCTACTCATGGGATCCCAAGTCGACTTACATTCACGAGCCACCATACTTCAAGGACATGACCATGGATCCTCCAGGTC
CACACAGTGTGAAGGATGCTTACTGTTTACTCAACTTTGGGGACAGTATCACAACTGATCACATCTCTCCAGCTGGTAACATCCAA
AAAGACGGTCCCGCTGCAGAATATCTCGTGGAGCGTGGCGTTGATCGCAAGGACTTCAACTCATATGGAAGTCGCCGTGGGAATGA
CGAAATAATGGCCAGGGGAACTTTTGCTAACATCCGTATCGTTAACAAGCTCATGAATGGGGAAGTTGGACCCAAGACTGTTCACA
TTCCTTCTGGAGAGAAGCTCTCGGTTTTTGACGCAGCCATGAGGTACAAATCATCTGGCGAAGACACTATTATTCTAGCTGGAGCC
GAGTATGGAAGTGGTAGCTCACGTGATTGGGCTGCTAAGGGACCTATGCTACAGGGTGTGAAAGCAGTGATTTCAAAGAGTTTTGA
AAGGATTCACCGAAGCAACTTGGTGGGAATGGGAATCATCCCGTTGTGCTTTAAGTCCGGTGAAGATGCAGACACACTTGGATTGA
CGGGTCATGAACGCTACACGATCCATCTCCCAACCGATATCTCAGAGATAAGACCTGGCCAAGATGTTACCGTCACTACAGACAAC
GGAAAGTCTTTCACTTGCACAGTTCGCTTCGACACTGAGGTGGAATTGGCATACTTCAACCATGGAGGTATACTTCCATATGTCAT
CAGAAACTTGAGCAAGCAGTAGTGAAAAGGTGAAAGGAACTCACGCATCTTTTTTTAATAAAGAGAAAAGGAGCTTTACGACCTGT
TTTCAAAATGTTATTTTCTTTGAAAAAGAGGCAGATAAGTCTGTCGAGGAGATCGATTTCCTGCACTATGAGATTTCAGTTGTTAG
TTTACTCGTATCGCTCCCTTTAAGTTTGTGCAACTTGCAGCAAGACATGAATATATTGTTTTCCGAAAGAAATAAAAACTAATCTC
TCTCTCTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_178634 aconitate hydratase 2 [Arabidopsis thaliana] | 2106 | 3e-234 |
| AAD25640 cytoplasmic aconitate hydratase [Arabidopsis thaliana] | 2106 | 3e-234 |
| XP_002883704 hypothetical protein ARALYDRAFT_480186 [Arabidopsis lyrata subsp. lyrata] | 2094 | 7e-233 |
| XP_002870438 predicted protein [Arabidopsis lyrata subsp. lyrata] | 2043 | 5e-227 |
| P49608 RecName: Full=Aconitate hydratase, cytoplasmic; Short=Aconitase; AltName: Full=Citrate hydro-lyase | 1928 | 1e-213 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SIB9 Aconitate hydratase 2, mitochondrial | 2106 | 1e-235 |
| P49608 Aconitate hydratase, cytoplasmic | 1928 | 5e-215 |
| Q6YZX6 Putative aconitate hydratase, cytoplasmic | 1926 | 8e-215 |
| O04916 Aconitate hydratase, cytoplasmic (Fragment) | 1886 | 4e-210 |
| Q42560 Aconitate hydratase 1 | 1850 | 5e-206 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B8BBF3 Putative uncharacterized protein | 1926 | 1e-213 |
| B9FZG0 Putative uncharacterized protein | 1926 | 1e-213 |
| B1Q486 Putative aconitase | 1921 | 5e-213 |
| D3GQL1 Aconitate hydratase 3 | 1916 | 2e-212 |
| B4FIT6 Putative uncharacterized protein | 1913 | 4e-212 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G05710.1 aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative | 2107 | 8e-237 |
| AT4G35830.1 aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO) | 1851 | 4e-207 |
| AT4G35830.2 aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO) | 1851 | 4e-207 |
| AT4G26970.1 aconitate hydratase/ copper ion binding | 1758 | 2e-196 |
| AT5G54950.1 aconitate hydratase-related / citrate hydro-lyase-related / aconitase-related | 241 | 2e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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