Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN08484

FASTA Sequence
Unigene ID: UN08484Length: 1279  SNP
GGGGATTCGATCTCGAGCAATCCTAAGTCCGTCTCTCTCTCTATACCTACTTCAAAACAAAAGGCGTTCGTTCGCTTTTCCTCTCT
AGCTCAATTCGTCATGTCTTGGTGCACGATCGAGTCGGATCCTGGTGTGTTTACAGAGCTTATTCAACAAATGCAAGTCAAAGGTG
TCCAGGTTGAAGAGTTGTACTCCCTTGATCTTGATTCTCTCAATAACCTCAGACCCGTGTACGGTCTGATCTTCCTTTTCAAATGG
CAAGCTGGCGTTAAAGATGATCGTCCAACGATCCAAGATCCAGTTTCTAACCTCTTTTTCGCAAACCAGGTCATTAACAATGCTTG
TGCAACCCAAGCGATCTTGTCTATCCTCTTGAACTCTCCCGACGTCGACATCGGTCCTGAGCTCTCGACGCTGAAAGAGTTCACCA
AGAACTTCCCATCTGACCTCAAGGGCTTGGCCATCAACAACAGCGAGGCGATAAGGACAGCTCACAACTCTTTCGCAAGGCCTGAG
CCATTTGTCCCCGAGGAACAGAAAGCTGCCACAAAAGACGACGACGTCTACCATTTCATTAGCTACATACCTGTGGATGGAGTCTT
GTACGAGCTCGACGGTCTCAAGGAAGGACCCATCAGCCTTGGTCCGTGCCCCGGGGACCAAAGCGGTATCGAGTGGCTGCAGCTGG
TTCAGCCGGTGATCCAAGAGAGGATCGAGAGGTACTCGCAGAGCGAGATTAGGTTCAATCTTTTGGCTGTGATTAAAAACAGGAAG
GATATTTACACGGCGGAGCTCAAGGAGCTTCAGAGGCAGAGGGAGCAGATGGTGCAGGAGTTGGCTGGTGTGGAGAAGAGCCGTGC
GGGGGAGCTTGAGGTGTTGATCGGTGAAGTGAGGAGCGGGATCGAAGCTGTGAGTGATAAGATTGTGATGGAGGAGGAGAAGTTCA
TGAAATGGAAGACGGAGAATATTAGGAGGAAGCACAACTACATTCCGTTTTTGTTCAATTTCCTCAAACTTCTTGCGGAGAAGAAA
CAGTTGAAACCTCTGATTGAGAAGGCCAAGAAACAGAAGACTGAAAGCTCCACTTGAGAAAAAAAACAGAACCTGTTTTGTGTCGG
TCTTTCCAAGAGGGCATTTGATACACTCTCCTGTCGTTATGTCTTTTATCACACAAGAAATATATTTTCTCTAGATGAAGTTTGAT
TCCCAATGGTTTTTGTTGGTTTTACATTCACAGTGAGTAATCTATCTGAAAGGTTATTAACATGTTTTGTGCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888437 ubiquitin carboxyl-terminal hydrolase family 1 protein [Arabidopsis lyrata subsp. lyrata]15443e-169
NP_564858 ubiquitin carboxyl-terminal hydrolase L5 [Arabidopsis thaliana]15382e-168
AAL06512 F5I14.29/F5I14.29 [Arabidopsis thaliana]15345e-168
XP_002262954 PREDICTED: hypothetical protein [Vitis vinifera]13714e-149
AAF23845 F1E22.3 [Arabidopsis thaliana]13331e-144

Swiss-Prot top hits (Blast detail)Scoree value
Q54N38 Ubiquitin carboxyl-terminal hydrolase isozyme L58173e-086
Q9Y5K5 Ubiquitin carboxyl-terminal hydrolase isozyme L58022e-084
Q9WUP7 Ubiquitin carboxyl-terminal hydrolase isozyme L58022e-084
Q06AT3 Ubiquitin carboxyl-terminal hydrolase isozyme L58012e-084
Q9XSJ0 Ubiquitin carboxyl-terminal hydrolase isozyme L56669e-069

TrEMBL top hits (Blast detail)Scoree value
O04482 F5I14.18 protein15381e-168
Q945M7 F5I14.29/F5I14.2915343e-168
A5AU65 Putative uncharacterized protein13713e-149
Q9SHY9 F1E22.313337e-145
B9S046 Ubiquitin carboxyl-terminal hydrolase isozyme L5, putative13329e-145

Arabidopsis top hits (Blast detail)Scoree value
AT1G65650.1 UCH2; ubiquitin thiolesterase/ ubiquitin-specific protease15395e-171
AT5G16310.1 UCH1; ubiquitin thiolesterase11336e-124

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  29%
 
181  14%
 
211  14%
 
62  29%
 
91  14%

Unigene MembersMember information